Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Gm37570-201ENSMUST00000195411 3106 ntBASIC6.57□□□□□ -1.36
Col4a6B1AVK5 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gm37762-201ENSMUST00000194515 3561 ntBASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gm11318-201ENSMUST00000118640 961 ntBASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gm14783-201ENSMUST00000118900 663 ntBASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Klra13-ps-201ENSMUST00000125813 802 ntBASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gm22636-201ENSMUST00000158142 275 ntBASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gm6611-201ENSMUST00000163830 1272 ntBASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Mir3110-201ENSMUST00000175053 80 ntBASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gm28467-201ENSMUST00000190981 318 ntBASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gm43561-201ENSMUST00000199866 448 ntBASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gm29778-201ENSMUST00000201667 466 ntBASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Prkaa1-202ENSMUST00000228218 4618 ntBASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gm44185-201ENSMUST00000204539 3307 ntBASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gm43581-201ENSMUST00000196766 2864 ntBASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col4a6B1AVK5 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Gm13137-201ENSMUST00000118035 345 ntBASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Gm22106-201ENSMUST00000122544 127 ntBASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Mir3095-201ENSMUST00000175552 87 ntBASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Gm1972-201ENSMUST00000181606 964 ntBASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Mir6992-201ENSMUST00000183342 109 ntBASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Gm44213-201ENSMUST00000204977 703 ntBASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Mir375-201ENSMUST00000083682 64 ntBASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Nup155-201ENSMUST00000163765 6402 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Utrn-205ENSMUST00000218635 11801 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Gm14521-201ENSMUST00000119545 350 ntBASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Gm13533-201ENSMUST00000121104 177 ntBASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Gm8761-201ENSMUST00000121507 955 ntBASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Gm24081-201ENSMUST00000175177 125 ntBASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Mirt2-201ENSMUST00000175179 285 ntBASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Gm43054-201ENSMUST00000199495 884 ntBASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Gm7825-201ENSMUST00000204046 416 ntBASIC6.55□□□□□ -1.36
Col4a6B1AVK5 AC123832.2-201ENSMUST00000215151 129 ntBASIC6.55□□□□□ -1.36
Col4a6B1AVK5 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms