Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Acbd5-201ENSMUST00000028121 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 AC122860.2-201ENSMUST00000217967 2671 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm31983-202ENSMUST00000210553 3155 ntTSL 5 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 AC154642.2-201ENSMUST00000223657 2485 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Rbm26-204ENSMUST00000163545 3270 ntTSL 5 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Rabep1-204ENSMUST00000108533 2791 ntAPPRIS ALT1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm26896-201ENSMUST00000180482 2526 ntTSL 5 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm44231-201ENSMUST00000204106 4075 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm22920-201ENSMUST00000102175 109 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm23255-201ENSMUST00000102244 110 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm25097-201ENSMUST00000104042 145 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm26286-201ENSMUST00000104166 134 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm26013-201ENSMUST00000104404 119 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm14193-201ENSMUST00000105067 153 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Calhm1-201ENSMUST00000111813 1047 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Vegfa-204ENSMUST00000113520 654 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm14882-201ENSMUST00000117216 218 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm12645-201ENSMUST00000117297 275 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm14706-201ENSMUST00000117744 255 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gng5-ps-201ENSMUST00000120931 205 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Defa-ps10-201ENSMUST00000121649 171 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm12453-201ENSMUST00000121981 331 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm25964-201ENSMUST00000157171 97 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm24440-201ENSMUST00000157236 63 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm24478-201ENSMUST00000157439 158 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 A730090N16Rik-201ENSMUST00000160137 627 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm20549-201ENSMUST00000174804 429 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Hcfc1r1-202ENSMUST00000179928 597 ntAPPRIS ALT2 TSL 3 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Mir6407-201ENSMUST00000184510 101 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm2914-201ENSMUST00000186120 328 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm28148-201ENSMUST00000186924 697 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm8004-201ENSMUST00000187782 617 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm34379-201ENSMUST00000195036 290 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm2939-201ENSMUST00000198496 478 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Crip1-205ENSMUST00000199089 509 ntTSL 3 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Igkv2-116-201ENSMUST00000199327 362 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm43962-201ENSMUST00000203898 190 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm44239-201ENSMUST00000204228 271 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm44976-201ENSMUST00000205543 261 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm5599-201ENSMUST00000209602 788 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms