Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.13■□□□□ 0.49
H2afb2S4R1M3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb2S4R1M3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
H2afb2S4R1M3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.13■□□□□ 0.49
H2afb2S4R1M3 Gm7291-201ENSMUST00000199147 382 ntBASIC18.13■□□□□ 0.49
H2afb2S4R1M3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb2S4R1M3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb2S4R1M3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.13■□□□□ 0.49
H2afb2S4R1M3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
H2afb2S4R1M3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb2S4R1M3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
H2afb2S4R1M3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb2S4R1M3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
H2afb2S4R1M3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb2S4R1M3 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.13■□□□□ 0.49
H2afb2S4R1M3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb2S4R1M3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
H2afb2S4R1M3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
H2afb2S4R1M3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afb2S4R1M3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afb2S4R1M3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afb2S4R1M3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afb2S4R1M3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
H2afb2S4R1M3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afb2S4R1M3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
H2afb2S4R1M3 Gm6211-202ENSMUST00000167849 925 ntBASIC18.12■□□□□ 0.49
H2afb2S4R1M3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
H2afb2S4R1M3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afb2S4R1M3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.12■□□□□ 0.49
H2afb2S4R1M3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afb2S4R1M3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afb2S4R1M3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
H2afb2S4R1M3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afb2S4R1M3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afb2S4R1M3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.11■□□□□ 0.49
H2afb2S4R1M3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.11■□□□□ 0.49
H2afb2S4R1M3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afb2S4R1M3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.11■□□□□ 0.49
H2afb2S4R1M3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afb2S4R1M3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.11■□□□□ 0.49
H2afb2S4R1M3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afb2S4R1M3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.11■□□□□ 0.49
H2afb2S4R1M3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
H2afb2S4R1M3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afb2S4R1M3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afb2S4R1M3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
H2afb2S4R1M3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afb2S4R1M3 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.11■□□□□ 0.49
H2afb2S4R1M3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.11■□□□□ 0.49
H2afb2S4R1M3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
H2afb2S4R1M3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afb2S4R1M3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afb2S4R1M3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb2S4R1M3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb2S4R1M3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
H2afb2S4R1M3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb2S4R1M3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
H2afb2S4R1M3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb2S4R1M3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb2S4R1M3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb2S4R1M3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.1■□□□□ 0.49
H2afb2S4R1M3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb2S4R1M3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
H2afb2S4R1M3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.1■□□□□ 0.49
H2afb2S4R1M3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb2S4R1M3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb2S4R1M3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb2S4R1M3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb2S4R1M3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb2S4R1M3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb2S4R1M3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb2S4R1M3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb2S4R1M3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb2S4R1M3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
H2afb2S4R1M3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
H2afb2S4R1M3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
H2afb2S4R1M3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
H2afb2S4R1M3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
H2afb2S4R1M3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
H2afb2S4R1M3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2afb2S4R1M3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
H2afb2S4R1M3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2afb2S4R1M3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2afb2S4R1M3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.09■□□□□ 0.49
H2afb2S4R1M3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.09■□□□□ 0.49
H2afb2S4R1M3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
H2afb2S4R1M3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2afb2S4R1M3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2afb2S4R1M3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
H2afb2S4R1M3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2afb2S4R1M3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2afb2S4R1M3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
H2afb2S4R1M3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2afb2S4R1M3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
H2afb2S4R1M3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2afb2S4R1M3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2afb2S4R1M3 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.08■□□□□ 0.49
H2afb2S4R1M3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
H2afb2S4R1M3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
H2afb2S4R1M3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms