Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb3S4R1G7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb3S4R1G7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb3S4R1G7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb3S4R1G7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb3S4R1G7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb3S4R1G7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.31■□□□□ 0.2
H2afb3S4R1G7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb3S4R1G7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb3S4R1G7 Gm13146-201ENSMUST00000118508 780 ntBASIC16.31■□□□□ 0.2
H2afb3S4R1G7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
H2afb3S4R1G7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb3S4R1G7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb3S4R1G7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb3S4R1G7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
H2afb3S4R1G7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb3S4R1G7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb3S4R1G7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb3S4R1G7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb3S4R1G7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.3■□□□□ 0.2
H2afb3S4R1G7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb3S4R1G7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb3S4R1G7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
H2afb3S4R1G7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb3S4R1G7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb3S4R1G7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb3S4R1G7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb3S4R1G7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.3■□□□□ 0.2
H2afb3S4R1G7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.3■□□□□ 0.2
H2afb3S4R1G7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb3S4R1G7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb3S4R1G7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb3S4R1G7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb3S4R1G7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
H2afb3S4R1G7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
H2afb3S4R1G7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb3S4R1G7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb3S4R1G7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb3S4R1G7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb3S4R1G7 Gm13234-201ENSMUST00000120010 747 ntBASIC16.29■□□□□ 0.2
H2afb3S4R1G7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.29■□□□□ 0.2
H2afb3S4R1G7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.29■□□□□ 0.2
H2afb3S4R1G7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb3S4R1G7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb3S4R1G7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb3S4R1G7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.29■□□□□ 0.2
H2afb3S4R1G7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb3S4R1G7 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.29■□□□□ 0.2
H2afb3S4R1G7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
H2afb3S4R1G7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb3S4R1G7 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb3S4R1G7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb3S4R1G7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
H2afb3S4R1G7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb3S4R1G7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb3S4R1G7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb3S4R1G7 Gm13534-201ENSMUST00000121169 513 ntBASIC16.27■□□□□ 0.2
H2afb3S4R1G7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
H2afb3S4R1G7 Gm42778-201ENSMUST00000199644 553 ntBASIC16.27■□□□□ 0.2
H2afb3S4R1G7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb3S4R1G7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb3S4R1G7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
H2afb3S4R1G7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H2afb3S4R1G7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
H2afb3S4R1G7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
H2afb3S4R1G7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H2afb3S4R1G7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
H2afb3S4R1G7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H2afb3S4R1G7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
H2afb3S4R1G7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.27■□□□□ 0.19
H2afb3S4R1G7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb3S4R1G7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb3S4R1G7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb3S4R1G7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms