Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm37292-201ENSMUST00000192062 758 ntBASIC18.8■□□□□ 0.6
Smarcb1Q9Z0H3 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.8■□□□□ 0.6
Smarcb1Q9Z0H3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcb1Q9Z0H3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Smarcb1Q9Z0H3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Smarcb1Q9Z0H3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcb1Q9Z0H3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcb1Q9Z0H3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Smarcb1Q9Z0H3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcb1Q9Z0H3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.79■□□□□ 0.6
Smarcb1Q9Z0H3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcb1Q9Z0H3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcb1Q9Z0H3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcb1Q9Z0H3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Smarcb1Q9Z0H3 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.79■□□□□ 0.6
Smarcb1Q9Z0H3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcb1Q9Z0H3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Smarcb1Q9Z0H3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcb1Q9Z0H3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcb1Q9Z0H3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Smarcb1Q9Z0H3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcb1Q9Z0H3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcb1Q9Z0H3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcb1Q9Z0H3 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.78■□□□□ 0.6
Smarcb1Q9Z0H3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcb1Q9Z0H3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcb1Q9Z0H3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcb1Q9Z0H3 Mir5122-201ENSMUST00000175004 89 ntBASIC18.78■□□□□ 0.6
Smarcb1Q9Z0H3 Mir2861-201ENSMUST00000175539 82 ntBASIC18.78■□□□□ 0.6
Smarcb1Q9Z0H3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.78■□□□□ 0.6
Smarcb1Q9Z0H3 Gm37055-201ENSMUST00000191866 133 ntBASIC18.78■□□□□ 0.6
Smarcb1Q9Z0H3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcb1Q9Z0H3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Smarcb1Q9Z0H3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcb1Q9Z0H3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcb1Q9Z0H3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.77■□□□□ 0.6
Smarcb1Q9Z0H3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcb1Q9Z0H3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcb1Q9Z0H3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcb1Q9Z0H3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcb1Q9Z0H3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcb1Q9Z0H3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcb1Q9Z0H3 Gm12382-201ENSMUST00000122005 922 ntBASIC18.77■□□□□ 0.6
Smarcb1Q9Z0H3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcb1Q9Z0H3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcb1Q9Z0H3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Smarcb1Q9Z0H3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcb1Q9Z0H3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcb1Q9Z0H3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.77■□□□□ 0.6
Smarcb1Q9Z0H3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Smarcb1Q9Z0H3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smarcb1Q9Z0H3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Smarcb1Q9Z0H3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcb1Q9Z0H3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcb1Q9Z0H3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcb1Q9Z0H3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Smarcb1Q9Z0H3 Gm11643-201ENSMUST00000119578 864 ntBASIC18.76■□□□□ 0.59
Smarcb1Q9Z0H3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.76■□□□□ 0.59
Smarcb1Q9Z0H3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcb1Q9Z0H3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.76■□□□□ 0.59
Smarcb1Q9Z0H3 Mir7071-201ENSMUST00000184847 69 ntBASIC18.76■□□□□ 0.59
Smarcb1Q9Z0H3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.76■□□□□ 0.59
Smarcb1Q9Z0H3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcb1Q9Z0H3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Smarcb1Q9Z0H3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcb1Q9Z0H3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcb1Q9Z0H3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcb1Q9Z0H3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcb1Q9Z0H3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcb1Q9Z0H3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcb1Q9Z0H3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Smarcb1Q9Z0H3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcb1Q9Z0H3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcb1Q9Z0H3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcb1Q9Z0H3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.75■□□□□ 0.59
Smarcb1Q9Z0H3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.75■□□□□ 0.59
Smarcb1Q9Z0H3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcb1Q9Z0H3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Smarcb1Q9Z0H3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Smarcb1Q9Z0H3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcb1Q9Z0H3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcb1Q9Z0H3 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.74■□□□□ 0.59
Smarcb1Q9Z0H3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Smarcb1Q9Z0H3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.74■□□□□ 0.59
Smarcb1Q9Z0H3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcb1Q9Z0H3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Smarcb1Q9Z0H3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Smarcb1Q9Z0H3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.74■□□□□ 0.59
Smarcb1Q9Z0H3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcb1Q9Z0H3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcb1Q9Z0H3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Smarcb1Q9Z0H3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcb1Q9Z0H3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcb1Q9Z0H3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcb1Q9Z0H3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcb1Q9Z0H3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Smarcb1Q9Z0H3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcb1Q9Z0H3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcb1Q9Z0H3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcb1Q9Z0H3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms