Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx9Q9WUH2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx9Q9WUH2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx9Q9WUH2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx9Q9WUH2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Lhx9Q9WUH2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx9Q9WUH2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx9Q9WUH2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.25■□□□□ 0.35
Lhx9Q9WUH2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx9Q9WUH2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.25■□□□□ 0.35
Lhx9Q9WUH2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Lhx9Q9WUH2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx9Q9WUH2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.25■□□□□ 0.35
Lhx9Q9WUH2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx9Q9WUH2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx9Q9WUH2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx9Q9WUH2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Lhx9Q9WUH2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Lhx9Q9WUH2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx9Q9WUH2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx9Q9WUH2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx9Q9WUH2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx9Q9WUH2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx9Q9WUH2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Lhx9Q9WUH2 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.24■□□□□ 0.35
Lhx9Q9WUH2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx9Q9WUH2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx9Q9WUH2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx9Q9WUH2 Gm6576-201ENSMUST00000169678 883 ntBASIC17.24■□□□□ 0.35
Lhx9Q9WUH2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx9Q9WUH2 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.24■□□□□ 0.35
Lhx9Q9WUH2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx9Q9WUH2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.24■□□□□ 0.35
Lhx9Q9WUH2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx9Q9WUH2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx9Q9WUH2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx9Q9WUH2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx9Q9WUH2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Lhx9Q9WUH2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx9Q9WUH2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx9Q9WUH2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.23■□□□□ 0.35
Lhx9Q9WUH2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx9Q9WUH2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Lhx9Q9WUH2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.23■□□□□ 0.35
Lhx9Q9WUH2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.23■□□□□ 0.35
Lhx9Q9WUH2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Lhx9Q9WUH2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx9Q9WUH2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx9Q9WUH2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx9Q9WUH2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx9Q9WUH2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lhx9Q9WUH2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx9Q9WUH2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx9Q9WUH2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx9Q9WUH2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx9Q9WUH2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx9Q9WUH2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.22■□□□□ 0.35
Lhx9Q9WUH2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx9Q9WUH2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx9Q9WUH2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx9Q9WUH2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx9Q9WUH2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lhx9Q9WUH2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lhx9Q9WUH2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lhx9Q9WUH2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lhx9Q9WUH2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Lhx9Q9WUH2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Lhx9Q9WUH2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lhx9Q9WUH2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lhx9Q9WUH2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lhx9Q9WUH2 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.21■□□□□ 0.35
Lhx9Q9WUH2 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.21■□□□□ 0.35
Lhx9Q9WUH2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.21■□□□□ 0.35
Lhx9Q9WUH2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lhx9Q9WUH2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lhx9Q9WUH2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lhx9Q9WUH2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Lhx9Q9WUH2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.2■□□□□ 0.34
Lhx9Q9WUH2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Lhx9Q9WUH2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lhx9Q9WUH2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lhx9Q9WUH2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Lhx9Q9WUH2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lhx9Q9WUH2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lhx9Q9WUH2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lhx9Q9WUH2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.2■□□□□ 0.34
Lhx9Q9WUH2 Gm13158-201ENSMUST00000122007 736 ntBASIC17.2■□□□□ 0.34
Lhx9Q9WUH2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.2■□□□□ 0.34
Lhx9Q9WUH2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.2■□□□□ 0.34
Lhx9Q9WUH2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lhx9Q9WUH2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lhx9Q9WUH2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lhx9Q9WUH2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lhx9Q9WUH2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lhx9Q9WUH2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lhx9Q9WUH2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lhx9Q9WUH2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lhx9Q9WUH2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.19■□□□□ 0.34
Lhx9Q9WUH2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lhx9Q9WUH2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms