Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Chaf1aQ9QWF0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chaf1aQ9QWF0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Chaf1aQ9QWF0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chaf1aQ9QWF0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chaf1aQ9QWF0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chaf1aQ9QWF0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chaf1aQ9QWF0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chaf1aQ9QWF0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Chaf1aQ9QWF0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chaf1aQ9QWF0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chaf1aQ9QWF0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chaf1aQ9QWF0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chaf1aQ9QWF0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chaf1aQ9QWF0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chaf1aQ9QWF0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chaf1aQ9QWF0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chaf1aQ9QWF0 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.27■□□□□ 0.83
Chaf1aQ9QWF0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chaf1aQ9QWF0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chaf1aQ9QWF0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Chaf1aQ9QWF0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Chaf1aQ9QWF0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chaf1aQ9QWF0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.26■□□□□ 0.83
Chaf1aQ9QWF0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
Chaf1aQ9QWF0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.26■□□□□ 0.83
Chaf1aQ9QWF0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chaf1aQ9QWF0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chaf1aQ9QWF0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chaf1aQ9QWF0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.26■□□□□ 0.83
Chaf1aQ9QWF0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chaf1aQ9QWF0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chaf1aQ9QWF0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Chaf1aQ9QWF0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chaf1aQ9QWF0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chaf1aQ9QWF0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Chaf1aQ9QWF0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chaf1aQ9QWF0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chaf1aQ9QWF0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Chaf1aQ9QWF0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Chaf1aQ9QWF0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chaf1aQ9QWF0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.25■□□□□ 0.83
Chaf1aQ9QWF0 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.25■□□□□ 0.83
Chaf1aQ9QWF0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chaf1aQ9QWF0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chaf1aQ9QWF0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chaf1aQ9QWF0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chaf1aQ9QWF0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chaf1aQ9QWF0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chaf1aQ9QWF0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chaf1aQ9QWF0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chaf1aQ9QWF0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chaf1aQ9QWF0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chaf1aQ9QWF0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.24■□□□□ 0.83
Chaf1aQ9QWF0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chaf1aQ9QWF0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chaf1aQ9QWF0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chaf1aQ9QWF0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chaf1aQ9QWF0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chaf1aQ9QWF0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Chaf1aQ9QWF0 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.24■□□□□ 0.83
Chaf1aQ9QWF0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chaf1aQ9QWF0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Chaf1aQ9QWF0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chaf1aQ9QWF0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chaf1aQ9QWF0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chaf1aQ9QWF0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chaf1aQ9QWF0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chaf1aQ9QWF0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Chaf1aQ9QWF0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chaf1aQ9QWF0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
Chaf1aQ9QWF0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chaf1aQ9QWF0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chaf1aQ9QWF0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chaf1aQ9QWF0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chaf1aQ9QWF0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chaf1aQ9QWF0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.22■□□□□ 0.83
Chaf1aQ9QWF0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chaf1aQ9QWF0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chaf1aQ9QWF0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.21■□□□□ 0.83
Chaf1aQ9QWF0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chaf1aQ9QWF0 Gm13146-201ENSMUST00000118508 780 ntBASIC20.21■□□□□ 0.83
Chaf1aQ9QWF0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.21■□□□□ 0.83
Chaf1aQ9QWF0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Chaf1aQ9QWF0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Chaf1aQ9QWF0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
Chaf1aQ9QWF0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Chaf1aQ9QWF0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Chaf1aQ9QWF0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chaf1aQ9QWF0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Chaf1aQ9QWF0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chaf1aQ9QWF0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chaf1aQ9QWF0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chaf1aQ9QWF0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Chaf1aQ9QWF0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chaf1aQ9QWF0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.2■□□□□ 0.82
Chaf1aQ9QWF0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chaf1aQ9QWF0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Chaf1aQ9QWF0 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.2■□□□□ 0.82
Chaf1aQ9QWF0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms