Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1fQ9JIS7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1fQ9JIS7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1fQ9JIS7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1fQ9JIS7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1fQ9JIS7 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.74■□□□□ 0.91
Cacna1fQ9JIS7 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.74■□□□□ 0.91
Cacna1fQ9JIS7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1fQ9JIS7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cacna1fQ9JIS7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cacna1fQ9JIS7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1fQ9JIS7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.74■□□□□ 0.91
Cacna1fQ9JIS7 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.74■□□□□ 0.91
Cacna1fQ9JIS7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1fQ9JIS7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1fQ9JIS7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1fQ9JIS7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1fQ9JIS7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Cacna1fQ9JIS7 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cacna1fQ9JIS7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1fQ9JIS7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1fQ9JIS7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.73■□□□□ 0.91
Cacna1fQ9JIS7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1fQ9JIS7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1fQ9JIS7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.72■□□□□ 0.91
Cacna1fQ9JIS7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Cacna1fQ9JIS7 Gm4974-201ENSMUST00000209974 875 ntBASIC20.72■□□□□ 0.91
Cacna1fQ9JIS7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1fQ9JIS7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cacna1fQ9JIS7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1fQ9JIS7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1fQ9JIS7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Cacna1fQ9JIS7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Cacna1fQ9JIS7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cacna1fQ9JIS7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1fQ9JIS7 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1fQ9JIS7 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.72■□□□□ 0.91
Cacna1fQ9JIS7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1fQ9JIS7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1fQ9JIS7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cacna1fQ9JIS7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Cacna1fQ9JIS7 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.71■□□□□ 0.91
Cacna1fQ9JIS7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1fQ9JIS7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1fQ9JIS7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cacna1fQ9JIS7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1fQ9JIS7 Tgds-204ENSMUST00000228543 1594 ntBASIC20.71■□□□□ 0.91
Cacna1fQ9JIS7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Cacna1fQ9JIS7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Cacna1fQ9JIS7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1fQ9JIS7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1fQ9JIS7 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1fQ9JIS7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1fQ9JIS7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1fQ9JIS7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1fQ9JIS7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1fQ9JIS7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cacna1fQ9JIS7 Gm13401-201ENSMUST00000117074 291 ntBASIC20.7■□□□□ 0.9
Cacna1fQ9JIS7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1fQ9JIS7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1fQ9JIS7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Cacna1fQ9JIS7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.7■□□□□ 0.9
Cacna1fQ9JIS7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1fQ9JIS7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1fQ9JIS7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1fQ9JIS7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.69■□□□□ 0.9
Cacna1fQ9JIS7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cacna1fQ9JIS7 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.69■□□□□ 0.9
Cacna1fQ9JIS7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Cacna1fQ9JIS7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1fQ9JIS7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1fQ9JIS7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1fQ9JIS7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1fQ9JIS7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.68■□□□□ 0.9
Cacna1fQ9JIS7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.67■□□□□ 0.9
Cacna1fQ9JIS7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1fQ9JIS7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.67■□□□□ 0.9
Cacna1fQ9JIS7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.67■□□□□ 0.9
Cacna1fQ9JIS7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1fQ9JIS7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1fQ9JIS7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1fQ9JIS7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1fQ9JIS7 Gm33142-201ENSMUST00000193913 867 ntBASIC20.66■□□□□ 0.9
Cacna1fQ9JIS7 Gm18101-201ENSMUST00000215769 548 ntBASIC20.66■□□□□ 0.9
Cacna1fQ9JIS7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1fQ9JIS7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1fQ9JIS7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1fQ9JIS7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1fQ9JIS7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1fQ9JIS7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1fQ9JIS7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1fQ9JIS7 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.66■□□□□ 0.9
Cacna1fQ9JIS7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Cacna1fQ9JIS7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1fQ9JIS7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1fQ9JIS7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1fQ9JIS7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1fQ9JIS7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1fQ9JIS7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1fQ9JIS7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms