Protein–RNA interactions for Protein: Q9JIG4

Ppp1r3f, Protein phosphatase 1 regulatory subunit 3F, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3fQ9JIG4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Ppp1r3fQ9JIG4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC23.07■■□□□ 1.28
Ppp1r3fQ9JIG4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ppp1r3fQ9JIG4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ppp1r3fQ9JIG4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC23.07■■□□□ 1.28
Ppp1r3fQ9JIG4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ppp1r3fQ9JIG4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC23.07■■□□□ 1.28
Ppp1r3fQ9JIG4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ppp1r3fQ9JIG4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ppp1r3fQ9JIG4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ppp1r3fQ9JIG4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ppp1r3fQ9JIG4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ppp1r3fQ9JIG4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC23.07■■□□□ 1.28
Ppp1r3fQ9JIG4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ppp1r3fQ9JIG4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
Ppp1r3fQ9JIG4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ppp1r3fQ9JIG4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ppp1r3fQ9JIG4 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ppp1r3fQ9JIG4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ppp1r3fQ9JIG4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC23.06■■□□□ 1.28
Ppp1r3fQ9JIG4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC23.06■■□□□ 1.28
Ppp1r3fQ9JIG4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC23.06■■□□□ 1.28
Ppp1r3fQ9JIG4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ppp1r3fQ9JIG4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Ppp1r3fQ9JIG4 Rarb-207ENSMUST00000225921 2756 ntBASIC23.06■■□□□ 1.28
Ppp1r3fQ9JIG4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ppp1r3fQ9JIG4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ppp1r3fQ9JIG4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC23.05■■□□□ 1.28
Ppp1r3fQ9JIG4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ppp1r3fQ9JIG4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ppp1r3fQ9JIG4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ppp1r3fQ9JIG4 AC121577.1-201ENSMUST00000227302 707 ntBASIC23.05■■□□□ 1.28
Ppp1r3fQ9JIG4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ppp1r3fQ9JIG4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ppp1r3fQ9JIG4 Dmtn-207ENSMUST00000228001 2437 ntBASIC23.05■■□□□ 1.28
Ppp1r3fQ9JIG4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ppp1r3fQ9JIG4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ppp1r3fQ9JIG4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ppp1r3fQ9JIG4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC23.05■■□□□ 1.28
Ppp1r3fQ9JIG4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ppp1r3fQ9JIG4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC23.04■■□□□ 1.28
Ppp1r3fQ9JIG4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ppp1r3fQ9JIG4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC23.04■■□□□ 1.28
Ppp1r3fQ9JIG4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ppp1r3fQ9JIG4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC23.04■■□□□ 1.28
Ppp1r3fQ9JIG4 AC154649.1-201ENSMUST00000227392 384 ntBASIC23.04■■□□□ 1.28
Ppp1r3fQ9JIG4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ppp1r3fQ9JIG4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Ppp1r3fQ9JIG4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC23.04■■□□□ 1.28
Ppp1r3fQ9JIG4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ppp1r3fQ9JIG4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Ppp1r3fQ9JIG4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ppp1r3fQ9JIG4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ppp1r3fQ9JIG4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ppp1r3fQ9JIG4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Ppp1r3fQ9JIG4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ppp1r3fQ9JIG4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Ppp1r3fQ9JIG4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC23.03■■□□□ 1.28
Ppp1r3fQ9JIG4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ppp1r3fQ9JIG4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ppp1r3fQ9JIG4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ppp1r3fQ9JIG4 Gm9987-201ENSMUST00000069768 567 ntBASIC23.03■■□□□ 1.28
Ppp1r3fQ9JIG4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ppp1r3fQ9JIG4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ppp1r3fQ9JIG4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ppp1r3fQ9JIG4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ppp1r3fQ9JIG4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC23.02■■□□□ 1.28
Ppp1r3fQ9JIG4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ppp1r3fQ9JIG4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ppp1r3fQ9JIG4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ppp1r3fQ9JIG4 Gm37055-201ENSMUST00000191866 133 ntBASIC23.02■■□□□ 1.28
Ppp1r3fQ9JIG4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Ppp1r3fQ9JIG4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC23.02■■□□□ 1.28
Ppp1r3fQ9JIG4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Ppp1r3fQ9JIG4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ppp1r3fQ9JIG4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ppp1r3fQ9JIG4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Ppp1r3fQ9JIG4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Ppp1r3fQ9JIG4 Gm42939-201ENSMUST00000197514 2205 ntBASIC23.01■■□□□ 1.27
Ppp1r3fQ9JIG4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ppp1r3fQ9JIG4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Ppp1r3fQ9JIG4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Ppp1r3fQ9JIG4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Ppp1r3fQ9JIG4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ppp1r3fQ9JIG4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ppp1r3fQ9JIG4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ppp1r3fQ9JIG4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ppp1r3fQ9JIG4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Ppp1r3fQ9JIG4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Ppp1r3fQ9JIG4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ppp1r3fQ9JIG4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ppp1r3fQ9JIG4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ppp1r3fQ9JIG4 Gm9484-201ENSMUST00000195892 1159 ntBASIC23■■□□□ 1.27
Ppp1r3fQ9JIG4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ppp1r3fQ9JIG4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Ppp1r3fQ9JIG4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ppp1r3fQ9JIG4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Ppp1r3fQ9JIG4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Ppp1r3fQ9JIG4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
Ppp1r3fQ9JIG4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms