Protein–RNA interactions for Protein: Q9JHF5

Tcirg1, V-type proton ATPase subunit a, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcirg1Q9JHF5 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tcirg1Q9JHF5 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Tcirg1Q9JHF5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tcirg1Q9JHF5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcirg1Q9JHF5 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcirg1Q9JHF5 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcirg1Q9JHF5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tcirg1Q9JHF5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.26■□□□□ 0.67
Tcirg1Q9JHF5 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.26■□□□□ 0.67
Tcirg1Q9JHF5 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.26■□□□□ 0.67
Tcirg1Q9JHF5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcirg1Q9JHF5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcirg1Q9JHF5 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcirg1Q9JHF5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcirg1Q9JHF5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcirg1Q9JHF5 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.25■□□□□ 0.67
Tcirg1Q9JHF5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tcirg1Q9JHF5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Tcirg1Q9JHF5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcirg1Q9JHF5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcirg1Q9JHF5 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcirg1Q9JHF5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcirg1Q9JHF5 Gm7290-201ENSMUST00000104990 617 ntBASIC19.25■□□□□ 0.67
Tcirg1Q9JHF5 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.25■□□□□ 0.67
Tcirg1Q9JHF5 Gm12918-201ENSMUST00000120234 636 ntBASIC19.25■□□□□ 0.67
Tcirg1Q9JHF5 Gm15710-201ENSMUST00000121821 636 ntBASIC19.25■□□□□ 0.67
Tcirg1Q9JHF5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcirg1Q9JHF5 Gm5075-201ENSMUST00000196916 622 ntBASIC19.25■□□□□ 0.67
Tcirg1Q9JHF5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.25■□□□□ 0.67
Tcirg1Q9JHF5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.25■□□□□ 0.67
Tcirg1Q9JHF5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcirg1Q9JHF5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcirg1Q9JHF5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tcirg1Q9JHF5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Tcirg1Q9JHF5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcirg1Q9JHF5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tcirg1Q9JHF5 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Tcirg1Q9JHF5 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tcirg1Q9JHF5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.24■□□□□ 0.67
Tcirg1Q9JHF5 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Tcirg1Q9JHF5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tcirg1Q9JHF5 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.24■□□□□ 0.67
Tcirg1Q9JHF5 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.24■□□□□ 0.67
Tcirg1Q9JHF5 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tcirg1Q9JHF5 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.24■□□□□ 0.67
Tcirg1Q9JHF5 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tcirg1Q9JHF5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tcirg1Q9JHF5 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tcirg1Q9JHF5 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tcirg1Q9JHF5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcirg1Q9JHF5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcirg1Q9JHF5 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.23■□□□□ 0.67
Tcirg1Q9JHF5 Gm4968-201ENSMUST00000071458 858 ntBASIC19.23■□□□□ 0.67
Tcirg1Q9JHF5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tcirg1Q9JHF5 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcirg1Q9JHF5 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcirg1Q9JHF5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcirg1Q9JHF5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcirg1Q9JHF5 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcirg1Q9JHF5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tcirg1Q9JHF5 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Tcirg1Q9JHF5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tcirg1Q9JHF5 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tcirg1Q9JHF5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tcirg1Q9JHF5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tcirg1Q9JHF5 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Tcirg1Q9JHF5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.22■□□□□ 0.67
Tcirg1Q9JHF5 Gm6211-202ENSMUST00000167849 925 ntBASIC19.22■□□□□ 0.67
Tcirg1Q9JHF5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tcirg1Q9JHF5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tcirg1Q9JHF5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Tcirg1Q9JHF5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Tcirg1Q9JHF5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tcirg1Q9JHF5 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tcirg1Q9JHF5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tcirg1Q9JHF5 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Tcirg1Q9JHF5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tcirg1Q9JHF5 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.66
Tcirg1Q9JHF5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tcirg1Q9JHF5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.2■□□□□ 0.66
Tcirg1Q9JHF5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tcirg1Q9JHF5 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tcirg1Q9JHF5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Tcirg1Q9JHF5 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.2■□□□□ 0.66
Tcirg1Q9JHF5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tcirg1Q9JHF5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tcirg1Q9JHF5 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.2■□□□□ 0.66
Tcirg1Q9JHF5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tcirg1Q9JHF5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tcirg1Q9JHF5 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tcirg1Q9JHF5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tcirg1Q9JHF5 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tcirg1Q9JHF5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tcirg1Q9JHF5 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tcirg1Q9JHF5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tcirg1Q9JHF5 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tcirg1Q9JHF5 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tcirg1Q9JHF5 Gm13148-201ENSMUST00000118892 745 ntBASIC19.19■□□□□ 0.66
Tcirg1Q9JHF5 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Tcirg1Q9JHF5 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms