Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ush1cQ9ES64 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ush1cQ9ES64 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.74■□□□□ 0.91
Ush1cQ9ES64 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ush1cQ9ES64 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ush1cQ9ES64 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ush1cQ9ES64 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ush1cQ9ES64 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Ush1cQ9ES64 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ush1cQ9ES64 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Ush1cQ9ES64 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.74■□□□□ 0.91
Ush1cQ9ES64 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ush1cQ9ES64 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ush1cQ9ES64 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ush1cQ9ES64 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ush1cQ9ES64 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
Ush1cQ9ES64 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Ush1cQ9ES64 Gm27454-201ENSMUST00000185090 204 ntBASIC20.73■□□□□ 0.91
Ush1cQ9ES64 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ush1cQ9ES64 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ush1cQ9ES64 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.73■□□□□ 0.91
Ush1cQ9ES64 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ush1cQ9ES64 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ush1cQ9ES64 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ush1cQ9ES64 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ush1cQ9ES64 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ush1cQ9ES64 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ush1cQ9ES64 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ush1cQ9ES64 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ush1cQ9ES64 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Ush1cQ9ES64 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ush1cQ9ES64 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ush1cQ9ES64 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ush1cQ9ES64 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ush1cQ9ES64 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ush1cQ9ES64 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.71■□□□□ 0.91
Ush1cQ9ES64 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ush1cQ9ES64 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ush1cQ9ES64 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ush1cQ9ES64 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ush1cQ9ES64 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ush1cQ9ES64 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.71■□□□□ 0.91
Ush1cQ9ES64 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ush1cQ9ES64 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ush1cQ9ES64 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ush1cQ9ES64 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ush1cQ9ES64 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Ush1cQ9ES64 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.7■□□□□ 0.9
Ush1cQ9ES64 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ush1cQ9ES64 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ush1cQ9ES64 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ush1cQ9ES64 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ush1cQ9ES64 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ush1cQ9ES64 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.7■□□□□ 0.9
Ush1cQ9ES64 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ush1cQ9ES64 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ush1cQ9ES64 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ush1cQ9ES64 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ush1cQ9ES64 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ush1cQ9ES64 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ush1cQ9ES64 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ush1cQ9ES64 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ush1cQ9ES64 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.69■□□□□ 0.9
Ush1cQ9ES64 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ush1cQ9ES64 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ush1cQ9ES64 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ush1cQ9ES64 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.69■□□□□ 0.9
Ush1cQ9ES64 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ush1cQ9ES64 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ush1cQ9ES64 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ush1cQ9ES64 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1cQ9ES64 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1cQ9ES64 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
Ush1cQ9ES64 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1cQ9ES64 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1cQ9ES64 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1cQ9ES64 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1cQ9ES64 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1cQ9ES64 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Ush1cQ9ES64 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1cQ9ES64 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1cQ9ES64 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1cQ9ES64 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1cQ9ES64 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1cQ9ES64 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1cQ9ES64 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1cQ9ES64 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1cQ9ES64 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Ush1cQ9ES64 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1cQ9ES64 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1cQ9ES64 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1cQ9ES64 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1cQ9ES64 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ush1cQ9ES64 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ush1cQ9ES64 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ush1cQ9ES64 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ush1cQ9ES64 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
Ush1cQ9ES64 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ush1cQ9ES64 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
Ush1cQ9ES64 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms