Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tubb3Q9ERD7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tubb3Q9ERD7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tubb3Q9ERD7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tubb3Q9ERD7 Gm12669-201ENSMUST00000122162 1009 ntBASIC18■□□□□ 0.47
Tubb3Q9ERD7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18■□□□□ 0.47
Tubb3Q9ERD7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tubb3Q9ERD7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18■□□□□ 0.47
Tubb3Q9ERD7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18■□□□□ 0.47
Tubb3Q9ERD7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tubb3Q9ERD7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Tubb3Q9ERD7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18■□□□□ 0.47
Tubb3Q9ERD7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tubb3Q9ERD7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tubb3Q9ERD7 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.99■□□□□ 0.47
Tubb3Q9ERD7 Gm7290-201ENSMUST00000104990 617 ntBASIC17.99■□□□□ 0.47
Tubb3Q9ERD7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.99■□□□□ 0.47
Tubb3Q9ERD7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Tubb3Q9ERD7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.99■□□□□ 0.47
Tubb3Q9ERD7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tubb3Q9ERD7 Gm12918-201ENSMUST00000120234 636 ntBASIC17.99■□□□□ 0.47
Tubb3Q9ERD7 Gm15710-201ENSMUST00000121821 636 ntBASIC17.99■□□□□ 0.47
Tubb3Q9ERD7 Gm5075-201ENSMUST00000196916 622 ntBASIC17.99■□□□□ 0.47
Tubb3Q9ERD7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.99■□□□□ 0.47
Tubb3Q9ERD7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.99■□□□□ 0.47
Tubb3Q9ERD7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tubb3Q9ERD7 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.99■□□□□ 0.47
Tubb3Q9ERD7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubb3Q9ERD7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Tubb3Q9ERD7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tubb3Q9ERD7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tubb3Q9ERD7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.97■□□□□ 0.47
Tubb3Q9ERD7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tubb3Q9ERD7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tubb3Q9ERD7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tubb3Q9ERD7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.97■□□□□ 0.47
Tubb3Q9ERD7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Tubb3Q9ERD7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Tubb3Q9ERD7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tubb3Q9ERD7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tubb3Q9ERD7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Tubb3Q9ERD7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.97■□□□□ 0.47
Tubb3Q9ERD7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubb3Q9ERD7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Tubb3Q9ERD7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tubb3Q9ERD7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Tubb3Q9ERD7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubb3Q9ERD7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubb3Q9ERD7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tubb3Q9ERD7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.96■□□□□ 0.47
Tubb3Q9ERD7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubb3Q9ERD7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubb3Q9ERD7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Tubb3Q9ERD7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubb3Q9ERD7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubb3Q9ERD7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.95■□□□□ 0.46
Tubb3Q9ERD7 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.95■□□□□ 0.46
Tubb3Q9ERD7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Tubb3Q9ERD7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubb3Q9ERD7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubb3Q9ERD7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Tubb3Q9ERD7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubb3Q9ERD7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubb3Q9ERD7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.95■□□□□ 0.46
Tubb3Q9ERD7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubb3Q9ERD7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubb3Q9ERD7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubb3Q9ERD7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tubb3Q9ERD7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubb3Q9ERD7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubb3Q9ERD7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubb3Q9ERD7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubb3Q9ERD7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms