Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Nif3l1Q9EQ80 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nif3l1Q9EQ80 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nif3l1Q9EQ80 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.01■□□□□ 0.47
Nif3l1Q9EQ80 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nif3l1Q9EQ80 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nif3l1Q9EQ80 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nif3l1Q9EQ80 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nif3l1Q9EQ80 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Nif3l1Q9EQ80 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Nif3l1Q9EQ80 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Nif3l1Q9EQ80 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nif3l1Q9EQ80 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nif3l1Q9EQ80 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nif3l1Q9EQ80 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nif3l1Q9EQ80 Dmtn-210ENSMUST00000228824 2377 ntBASIC18■□□□□ 0.47
Nif3l1Q9EQ80 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nif3l1Q9EQ80 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Nif3l1Q9EQ80 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18■□□□□ 0.47
Nif3l1Q9EQ80 Gm44549-201ENSMUST00000208351 577 ntBASIC18■□□□□ 0.47
Nif3l1Q9EQ80 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18■□□□□ 0.47
Nif3l1Q9EQ80 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nif3l1Q9EQ80 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nif3l1Q9EQ80 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nif3l1Q9EQ80 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Nif3l1Q9EQ80 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nif3l1Q9EQ80 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.99■□□□□ 0.47
Nif3l1Q9EQ80 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nif3l1Q9EQ80 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nif3l1Q9EQ80 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.99■□□□□ 0.47
Nif3l1Q9EQ80 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.99■□□□□ 0.47
Nif3l1Q9EQ80 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nif3l1Q9EQ80 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nif3l1Q9EQ80 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nif3l1Q9EQ80 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nif3l1Q9EQ80 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Nif3l1Q9EQ80 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.99■□□□□ 0.47
Nif3l1Q9EQ80 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.98■□□□□ 0.47
Nif3l1Q9EQ80 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nif3l1Q9EQ80 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nif3l1Q9EQ80 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Nif3l1Q9EQ80 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Nif3l1Q9EQ80 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nif3l1Q9EQ80 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Nif3l1Q9EQ80 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nif3l1Q9EQ80 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nif3l1Q9EQ80 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nif3l1Q9EQ80 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nif3l1Q9EQ80 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nif3l1Q9EQ80 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nif3l1Q9EQ80 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.98■□□□□ 0.47
Nif3l1Q9EQ80 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nif3l1Q9EQ80 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Nif3l1Q9EQ80 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nif3l1Q9EQ80 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nif3l1Q9EQ80 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nif3l1Q9EQ80 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nif3l1Q9EQ80 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nif3l1Q9EQ80 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.97■□□□□ 0.47
Nif3l1Q9EQ80 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.97■□□□□ 0.47
Nif3l1Q9EQ80 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Nif3l1Q9EQ80 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nif3l1Q9EQ80 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nif3l1Q9EQ80 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nif3l1Q9EQ80 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.97■□□□□ 0.47
Nif3l1Q9EQ80 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.97■□□□□ 0.47
Nif3l1Q9EQ80 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nif3l1Q9EQ80 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Nif3l1Q9EQ80 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nif3l1Q9EQ80 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nif3l1Q9EQ80 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nif3l1Q9EQ80 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nif3l1Q9EQ80 Gm2399-201ENSMUST00000104944 225 ntBASIC17.96■□□□□ 0.47
Nif3l1Q9EQ80 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nif3l1Q9EQ80 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.96■□□□□ 0.47
Nif3l1Q9EQ80 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nif3l1Q9EQ80 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Nif3l1Q9EQ80 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nif3l1Q9EQ80 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.96■□□□□ 0.47
Nif3l1Q9EQ80 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.96■□□□□ 0.47
Nif3l1Q9EQ80 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.96■□□□□ 0.47
Nif3l1Q9EQ80 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.96■□□□□ 0.47
Nif3l1Q9EQ80 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nif3l1Q9EQ80 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nif3l1Q9EQ80 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Nif3l1Q9EQ80 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nif3l1Q9EQ80 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nif3l1Q9EQ80 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Nif3l1Q9EQ80 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Nif3l1Q9EQ80 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Nif3l1Q9EQ80 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Nif3l1Q9EQ80 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nif3l1Q9EQ80 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Nif3l1Q9EQ80 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nif3l1Q9EQ80 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nif3l1Q9EQ80 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Nif3l1Q9EQ80 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Nif3l1Q9EQ80 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.95■□□□□ 0.46
Nif3l1Q9EQ80 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.95■□□□□ 0.46
Nif3l1Q9EQ80 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms