Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Cpsf1Q9EPU4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Cpsf1Q9EPU4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Cpsf1Q9EPU4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC25.16■■□□□ 1.62
Cpsf1Q9EPU4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Cpsf1Q9EPU4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Cpsf1Q9EPU4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
Cpsf1Q9EPU4 Iqck-206ENSMUST00000208658 2891 ntBASIC25.16■■□□□ 1.62
Cpsf1Q9EPU4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Cpsf1Q9EPU4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Cpsf1Q9EPU4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Cpsf1Q9EPU4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
Cpsf1Q9EPU4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC25.16■■□□□ 1.62
Cpsf1Q9EPU4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
Cpsf1Q9EPU4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Cpsf1Q9EPU4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Cpsf1Q9EPU4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Cpsf1Q9EPU4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Cpsf1Q9EPU4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
Cpsf1Q9EPU4 Gm13836-201ENSMUST00000121159 501 ntBASIC25.15■■□□□ 1.62
Cpsf1Q9EPU4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Cpsf1Q9EPU4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cpsf1Q9EPU4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cpsf1Q9EPU4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cpsf1Q9EPU4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cpsf1Q9EPU4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Cpsf1Q9EPU4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Cpsf1Q9EPU4 Gm12382-201ENSMUST00000122005 922 ntBASIC25.14■■□□□ 1.62
Cpsf1Q9EPU4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Cpsf1Q9EPU4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC25.14■■□□□ 1.62
Cpsf1Q9EPU4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Cpsf1Q9EPU4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Cpsf1Q9EPU4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
Cpsf1Q9EPU4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
Cpsf1Q9EPU4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC25.13■■□□□ 1.61
Cpsf1Q9EPU4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Cpsf1Q9EPU4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Cpsf1Q9EPU4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Cpsf1Q9EPU4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Cpsf1Q9EPU4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Cpsf1Q9EPU4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC25.13■■□□□ 1.61
Cpsf1Q9EPU4 Gm38342-201ENSMUST00000195710 2980 ntBASIC25.13■■□□□ 1.61
Cpsf1Q9EPU4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC25.13■■□□□ 1.61
Cpsf1Q9EPU4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Cpsf1Q9EPU4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cpsf1Q9EPU4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Cpsf1Q9EPU4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cpsf1Q9EPU4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cpsf1Q9EPU4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Cpsf1Q9EPU4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cpsf1Q9EPU4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cpsf1Q9EPU4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Cpsf1Q9EPU4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cpsf1Q9EPU4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC25.12■■□□□ 1.61
Cpsf1Q9EPU4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cpsf1Q9EPU4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC25.12■■□□□ 1.61
Cpsf1Q9EPU4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cpsf1Q9EPU4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC25.12■■□□□ 1.61
Cpsf1Q9EPU4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cpsf1Q9EPU4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC25.12■■□□□ 1.61
Cpsf1Q9EPU4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cpsf1Q9EPU4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
Cpsf1Q9EPU4 AC135963.1-201ENSMUST00000211640 717 ntBASIC25.12■■□□□ 1.61
Cpsf1Q9EPU4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Cpsf1Q9EPU4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Cpsf1Q9EPU4 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cpsf1Q9EPU4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Cpsf1Q9EPU4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC25.11■■□□□ 1.61
Cpsf1Q9EPU4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Cpsf1Q9EPU4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Cpsf1Q9EPU4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Cpsf1Q9EPU4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Cpsf1Q9EPU4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Cpsf1Q9EPU4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Cpsf1Q9EPU4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Cpsf1Q9EPU4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Cpsf1Q9EPU4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
Cpsf1Q9EPU4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Cpsf1Q9EPU4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC25.1■■□□□ 1.61
Cpsf1Q9EPU4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Cpsf1Q9EPU4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Cpsf1Q9EPU4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Cpsf1Q9EPU4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Cpsf1Q9EPU4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Cpsf1Q9EPU4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Cpsf1Q9EPU4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Cpsf1Q9EPU4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Cpsf1Q9EPU4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC25.09■■□□□ 1.61
Cpsf1Q9EPU4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Cpsf1Q9EPU4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Cpsf1Q9EPU4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC25.09■■□□□ 1.61
Cpsf1Q9EPU4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Cpsf1Q9EPU4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Cpsf1Q9EPU4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Cpsf1Q9EPU4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC25.09■■□□□ 1.61
Cpsf1Q9EPU4 Gm16042-201ENSMUST00000204813 1247 ntBASIC25.09■■□□□ 1.61
Cpsf1Q9EPU4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC25.09■■□□□ 1.61
Cpsf1Q9EPU4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Cpsf1Q9EPU4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Cpsf1Q9EPU4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms