Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn3Q9DCB1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn3Q9DCB1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn3Q9DCB1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.03■□□□□ 0.32
Hmgn3Q9DCB1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Hmgn3Q9DCB1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn3Q9DCB1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn3Q9DCB1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn3Q9DCB1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn3Q9DCB1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn3Q9DCB1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.03■□□□□ 0.32
Hmgn3Q9DCB1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.03■□□□□ 0.32
Hmgn3Q9DCB1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.03■□□□□ 0.32
Hmgn3Q9DCB1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Hmgn3Q9DCB1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn3Q9DCB1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn3Q9DCB1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Hmgn3Q9DCB1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn3Q9DCB1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn3Q9DCB1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn3Q9DCB1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Hmgn3Q9DCB1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn3Q9DCB1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn3Q9DCB1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn3Q9DCB1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn3Q9DCB1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn3Q9DCB1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn3Q9DCB1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn3Q9DCB1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.02■□□□□ 0.32
Hmgn3Q9DCB1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn3Q9DCB1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
Hmgn3Q9DCB1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
Hmgn3Q9DCB1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
Hmgn3Q9DCB1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.02■□□□□ 0.32
Hmgn3Q9DCB1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgn3Q9DCB1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgn3Q9DCB1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Hmgn3Q9DCB1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgn3Q9DCB1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgn3Q9DCB1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.02■□□□□ 0.31
Hmgn3Q9DCB1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgn3Q9DCB1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgn3Q9DCB1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgn3Q9DCB1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgn3Q9DCB1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Hmgn3Q9DCB1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgn3Q9DCB1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgn3Q9DCB1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgn3Q9DCB1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgn3Q9DCB1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgn3Q9DCB1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgn3Q9DCB1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgn3Q9DCB1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgn3Q9DCB1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgn3Q9DCB1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Hmgn3Q9DCB1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
Hmgn3Q9DCB1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgn3Q9DCB1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgn3Q9DCB1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgn3Q9DCB1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgn3Q9DCB1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgn3Q9DCB1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Hmgn3Q9DCB1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgn3Q9DCB1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgn3Q9DCB1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17■□□□□ 0.31
Hmgn3Q9DCB1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Hmgn3Q9DCB1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hmgn3Q9DCB1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
Hmgn3Q9DCB1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgn3Q9DCB1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Hmgn3Q9DCB1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Hmgn3Q9DCB1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hmgn3Q9DCB1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgn3Q9DCB1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgn3Q9DCB1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgn3Q9DCB1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Hmgn3Q9DCB1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgn3Q9DCB1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgn3Q9DCB1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Hmgn3Q9DCB1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgn3Q9DCB1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.99■□□□□ 0.31
Hmgn3Q9DCB1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgn3Q9DCB1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgn3Q9DCB1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Hmgn3Q9DCB1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgn3Q9DCB1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.98■□□□□ 0.31
Hmgn3Q9DCB1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgn3Q9DCB1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.98■□□□□ 0.31
Hmgn3Q9DCB1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgn3Q9DCB1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.98■□□□□ 0.31
Hmgn3Q9DCB1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgn3Q9DCB1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgn3Q9DCB1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgn3Q9DCB1 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.98■□□□□ 0.31
Hmgn3Q9DCB1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgn3Q9DCB1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgn3Q9DCB1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Hmgn3Q9DCB1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgn3Q9DCB1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgn3Q9DCB1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms