Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpne8Q9DC53 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpne8Q9DC53 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.9■□□□□ 0.62
Cpne8Q9DC53 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne8Q9DC53 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne8Q9DC53 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne8Q9DC53 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne8Q9DC53 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne8Q9DC53 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.9■□□□□ 0.62
Cpne8Q9DC53 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne8Q9DC53 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne8Q9DC53 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.9■□□□□ 0.62
Cpne8Q9DC53 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne8Q9DC53 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne8Q9DC53 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne8Q9DC53 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne8Q9DC53 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne8Q9DC53 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne8Q9DC53 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne8Q9DC53 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne8Q9DC53 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne8Q9DC53 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne8Q9DC53 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne8Q9DC53 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne8Q9DC53 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne8Q9DC53 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
Cpne8Q9DC53 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.89■□□□□ 0.61
Cpne8Q9DC53 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.89■□□□□ 0.61
Cpne8Q9DC53 Gm7291-201ENSMUST00000199147 382 ntBASIC18.89■□□□□ 0.61
Cpne8Q9DC53 Gm42569-201ENSMUST00000200539 472 ntBASIC18.89■□□□□ 0.61
Cpne8Q9DC53 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.89■□□□□ 0.61
Cpne8Q9DC53 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne8Q9DC53 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.89■□□□□ 0.61
Cpne8Q9DC53 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne8Q9DC53 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne8Q9DC53 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.89■□□□□ 0.61
Cpne8Q9DC53 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne8Q9DC53 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.89■□□□□ 0.61
Cpne8Q9DC53 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne8Q9DC53 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne8Q9DC53 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne8Q9DC53 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpne8Q9DC53 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpne8Q9DC53 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cpne8Q9DC53 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpne8Q9DC53 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Cpne8Q9DC53 Gm22325-201ENSMUST00000158904 308 ntBASIC18.88■□□□□ 0.61
Cpne8Q9DC53 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cpne8Q9DC53 Gm6365-201ENSMUST00000054711 744 ntBASIC18.88■□□□□ 0.61
Cpne8Q9DC53 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cpne8Q9DC53 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cpne8Q9DC53 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.88■□□□□ 0.61
Cpne8Q9DC53 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpne8Q9DC53 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpne8Q9DC53 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne8Q9DC53 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne8Q9DC53 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne8Q9DC53 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne8Q9DC53 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.87■□□□□ 0.61
Cpne8Q9DC53 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.87■□□□□ 0.61
Cpne8Q9DC53 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne8Q9DC53 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.87■□□□□ 0.61
Cpne8Q9DC53 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne8Q9DC53 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.87■□□□□ 0.61
Cpne8Q9DC53 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne8Q9DC53 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne8Q9DC53 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne8Q9DC53 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne8Q9DC53 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne8Q9DC53 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne8Q9DC53 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne8Q9DC53 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne8Q9DC53 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne8Q9DC53 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne8Q9DC53 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne8Q9DC53 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.86■□□□□ 0.61
Cpne8Q9DC53 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne8Q9DC53 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne8Q9DC53 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne8Q9DC53 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.86■□□□□ 0.61
Cpne8Q9DC53 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne8Q9DC53 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne8Q9DC53 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Cpne8Q9DC53 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne8Q9DC53 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne8Q9DC53 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne8Q9DC53 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.86■□□□□ 0.61
Cpne8Q9DC53 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne8Q9DC53 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cpne8Q9DC53 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpne8Q9DC53 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cpne8Q9DC53 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cpne8Q9DC53 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.85■□□□□ 0.61
Cpne8Q9DC53 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.85■□□□□ 0.61
Cpne8Q9DC53 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpne8Q9DC53 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpne8Q9DC53 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpne8Q9DC53 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpne8Q9DC53 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpne8Q9DC53 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms