Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm13436-201ENSMUST00000120418 567 ntBASIC17.77■□□□□ 0.44
Rrp8Q9DB85 Gm13559-201ENSMUST00000120476 863 ntBASIC17.77■□□□□ 0.44
Rrp8Q9DB85 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.77■□□□□ 0.44
Rrp8Q9DB85 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Rrp8Q9DB85 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.77■□□□□ 0.44
Rrp8Q9DB85 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rrp8Q9DB85 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rrp8Q9DB85 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rrp8Q9DB85 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rrp8Q9DB85 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Rrp8Q9DB85 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rrp8Q9DB85 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rrp8Q9DB85 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Rrp8Q9DB85 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rrp8Q9DB85 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.76■□□□□ 0.43
Rrp8Q9DB85 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rrp8Q9DB85 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rrp8Q9DB85 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rrp8Q9DB85 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rrp8Q9DB85 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.76■□□□□ 0.43
Rrp8Q9DB85 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rrp8Q9DB85 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rrp8Q9DB85 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rrp8Q9DB85 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.75■□□□□ 0.43
Rrp8Q9DB85 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rrp8Q9DB85 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rrp8Q9DB85 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rrp8Q9DB85 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.75■□□□□ 0.43
Rrp8Q9DB85 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rrp8Q9DB85 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rrp8Q9DB85 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rrp8Q9DB85 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Rrp8Q9DB85 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rrp8Q9DB85 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.75■□□□□ 0.43
Rrp8Q9DB85 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rrp8Q9DB85 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rrp8Q9DB85 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rrp8Q9DB85 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rrp8Q9DB85 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rrp8Q9DB85 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rrp8Q9DB85 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rrp8Q9DB85 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rrp8Q9DB85 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rrp8Q9DB85 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rrp8Q9DB85 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rrp8Q9DB85 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rrp8Q9DB85 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.74■□□□□ 0.43
Rrp8Q9DB85 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Rrp8Q9DB85 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rrp8Q9DB85 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.74■□□□□ 0.43
Rrp8Q9DB85 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rrp8Q9DB85 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rrp8Q9DB85 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rrp8Q9DB85 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rrp8Q9DB85 Gm3375-201ENSMUST00000203929 796 ntBASIC17.74■□□□□ 0.43
Rrp8Q9DB85 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.74■□□□□ 0.43
Rrp8Q9DB85 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rrp8Q9DB85 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.74■□□□□ 0.43
Rrp8Q9DB85 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rrp8Q9DB85 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rrp8Q9DB85 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rrp8Q9DB85 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rrp8Q9DB85 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Rrp8Q9DB85 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rrp8Q9DB85 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rrp8Q9DB85 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rrp8Q9DB85 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rrp8Q9DB85 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rrp8Q9DB85 Gm7889-201ENSMUST00000185591 958 ntBASIC17.73■□□□□ 0.43
Rrp8Q9DB85 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.73■□□□□ 0.43
Rrp8Q9DB85 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rrp8Q9DB85 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rrp8Q9DB85 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rrp8Q9DB85 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rrp8Q9DB85 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rrp8Q9DB85 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rrp8Q9DB85 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rrp8Q9DB85 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rrp8Q9DB85 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rrp8Q9DB85 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rrp8Q9DB85 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.72■□□□□ 0.43
Rrp8Q9DB85 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rrp8Q9DB85 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Rrp8Q9DB85 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.72■□□□□ 0.43
Rrp8Q9DB85 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rrp8Q9DB85 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.72■□□□□ 0.43
Rrp8Q9DB85 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Rrp8Q9DB85 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.72■□□□□ 0.43
Rrp8Q9DB85 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.72■□□□□ 0.43
Rrp8Q9DB85 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.72■□□□□ 0.43
Rrp8Q9DB85 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rrp8Q9DB85 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rrp8Q9DB85 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rrp8Q9DB85 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rrp8Q9DB85 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rrp8Q9DB85 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rrp8Q9DB85 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rrp8Q9DB85 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rrp8Q9DB85 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rrp8Q9DB85 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms