Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upk3bl1Q9D701 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Upk3bl1Q9D701 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upk3bl1Q9D701 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upk3bl1Q9D701 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Upk3bl1Q9D701 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Upk3bl1Q9D701 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upk3bl1Q9D701 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upk3bl1Q9D701 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upk3bl1Q9D701 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upk3bl1Q9D701 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.46■□□□□ 0.23
Upk3bl1Q9D701 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Upk3bl1Q9D701 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.46■□□□□ 0.23
Upk3bl1Q9D701 Gm37444-201ENSMUST00000193605 439 ntBASIC16.46■□□□□ 0.23
Upk3bl1Q9D701 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Upk3bl1Q9D701 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upk3bl1Q9D701 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upk3bl1Q9D701 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upk3bl1Q9D701 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upk3bl1Q9D701 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upk3bl1Q9D701 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Upk3bl1Q9D701 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Upk3bl1Q9D701 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Upk3bl1Q9D701 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upk3bl1Q9D701 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upk3bl1Q9D701 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upk3bl1Q9D701 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Upk3bl1Q9D701 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk3bl1Q9D701 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk3bl1Q9D701 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk3bl1Q9D701 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
Upk3bl1Q9D701 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Upk3bl1Q9D701 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Upk3bl1Q9D701 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.45■□□□□ 0.22
Upk3bl1Q9D701 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Upk3bl1Q9D701 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Upk3bl1Q9D701 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Upk3bl1Q9D701 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Upk3bl1Q9D701 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Upk3bl1Q9D701 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk3bl1Q9D701 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Upk3bl1Q9D701 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk3bl1Q9D701 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.45■□□□□ 0.22
Upk3bl1Q9D701 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk3bl1Q9D701 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk3bl1Q9D701 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.45■□□□□ 0.22
Upk3bl1Q9D701 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk3bl1Q9D701 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk3bl1Q9D701 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk3bl1Q9D701 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk3bl1Q9D701 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk3bl1Q9D701 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Upk3bl1Q9D701 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Upk3bl1Q9D701 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk3bl1Q9D701 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk3bl1Q9D701 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Upk3bl1Q9D701 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Upk3bl1Q9D701 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Upk3bl1Q9D701 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.44■□□□□ 0.22
Upk3bl1Q9D701 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk3bl1Q9D701 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk3bl1Q9D701 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk3bl1Q9D701 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk3bl1Q9D701 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk3bl1Q9D701 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk3bl1Q9D701 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk3bl1Q9D701 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Upk3bl1Q9D701 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk3bl1Q9D701 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk3bl1Q9D701 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Upk3bl1Q9D701 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Upk3bl1Q9D701 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upk3bl1Q9D701 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upk3bl1Q9D701 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upk3bl1Q9D701 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Upk3bl1Q9D701 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms