Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc7Q9D541 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.22■□□□□ 0.99
Ccdc7Q9D541 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.22■□□□□ 0.99
Ccdc7Q9D541 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc7Q9D541 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc7Q9D541 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc7Q9D541 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc7Q9D541 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc7Q9D541 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc7Q9D541 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc7Q9D541 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc7Q9D541 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.21■□□□□ 0.99
Ccdc7Q9D541 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc7Q9D541 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
Ccdc7Q9D541 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc7Q9D541 Gm42642-201ENSMUST00000200683 355 ntBASIC21.21■□□□□ 0.99
Ccdc7Q9D541 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.21■□□□□ 0.99
Ccdc7Q9D541 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
Ccdc7Q9D541 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc7Q9D541 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc7Q9D541 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc7Q9D541 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc7Q9D541 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc7Q9D541 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc7Q9D541 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Ccdc7Q9D541 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc7Q9D541 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.2■□□□□ 0.98
Ccdc7Q9D541 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.2■□□□□ 0.98
Ccdc7Q9D541 Gm18671-201ENSMUST00000214826 683 ntBASIC21.2■□□□□ 0.98
Ccdc7Q9D541 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc7Q9D541 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc7Q9D541 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc7Q9D541 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc7Q9D541 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ccdc7Q9D541 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ccdc7Q9D541 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc7Q9D541 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc7Q9D541 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc7Q9D541 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc7Q9D541 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc7Q9D541 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc7Q9D541 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc7Q9D541 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.19■□□□□ 0.98
Ccdc7Q9D541 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc7Q9D541 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc7Q9D541 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.18■□□□□ 0.98
Ccdc7Q9D541 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc7Q9D541 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Ccdc7Q9D541 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc7Q9D541 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ccdc7Q9D541 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc7Q9D541 AV356131-201ENSMUST00000206201 750 ntBASIC21.18■□□□□ 0.98
Ccdc7Q9D541 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.18■□□□□ 0.98
Ccdc7Q9D541 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc7Q9D541 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.18■□□□□ 0.98
Ccdc7Q9D541 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc7Q9D541 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc7Q9D541 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc7Q9D541 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.18■□□□□ 0.98
Ccdc7Q9D541 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc7Q9D541 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc7Q9D541 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc7Q9D541 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc7Q9D541 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc7Q9D541 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc7Q9D541 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc7Q9D541 Gm10849-201ENSMUST00000100397 618 ntBASIC21.17■□□□□ 0.98
Ccdc7Q9D541 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.17■□□□□ 0.98
Ccdc7Q9D541 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc7Q9D541 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC21.17■□□□□ 0.98
Ccdc7Q9D541 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc7Q9D541 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc7Q9D541 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc7Q9D541 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc7Q9D541 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc7Q9D541 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc7Q9D541 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc7Q9D541 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc7Q9D541 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc7Q9D541 Idnk-204ENSMUST00000226010 1898 ntBASIC21.16■□□□□ 0.98
Ccdc7Q9D541 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc7Q9D541 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc7Q9D541 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.16■□□□□ 0.98
Ccdc7Q9D541 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc7Q9D541 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.16■□□□□ 0.98
Ccdc7Q9D541 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc7Q9D541 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc7Q9D541 Gm5874-201ENSMUST00000096101 508 ntBASIC21.16■□□□□ 0.98
Ccdc7Q9D541 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc7Q9D541 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc7Q9D541 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc7Q9D541 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc7Q9D541 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ccdc7Q9D541 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc7Q9D541 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.15■□□□□ 0.98
Ccdc7Q9D541 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc7Q9D541 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc7Q9D541 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc7Q9D541 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC21.15■□□□□ 0.98
Ccdc7Q9D541 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms