Protein–RNA interactions for Protein: Q9D4E6

Pabpc6, Polyadenylate-binding protein, mousemouse

Known RBP Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc6Q9D4E6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpc6Q9D4E6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.21■□□□□ 0.83
Pabpc6Q9D4E6 Gm10812-201ENSMUST00000099864 546 ntBASIC20.21■□□□□ 0.83
Pabpc6Q9D4E6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpc6Q9D4E6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpc6Q9D4E6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpc6Q9D4E6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpc6Q9D4E6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpc6Q9D4E6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpc6Q9D4E6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpc6Q9D4E6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpc6Q9D4E6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.2■□□□□ 0.82
Pabpc6Q9D4E6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpc6Q9D4E6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpc6Q9D4E6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpc6Q9D4E6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpc6Q9D4E6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.2■□□□□ 0.82
Pabpc6Q9D4E6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.2■□□□□ 0.82
Pabpc6Q9D4E6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.2■□□□□ 0.82
Pabpc6Q9D4E6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpc6Q9D4E6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpc6Q9D4E6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpc6Q9D4E6 Tgds-204ENSMUST00000228543 1594 ntBASIC20.2■□□□□ 0.82
Pabpc6Q9D4E6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpc6Q9D4E6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpc6Q9D4E6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpc6Q9D4E6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpc6Q9D4E6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpc6Q9D4E6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpc6Q9D4E6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.19■□□□□ 0.82
Pabpc6Q9D4E6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpc6Q9D4E6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Pabpc6Q9D4E6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpc6Q9D4E6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpc6Q9D4E6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpc6Q9D4E6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpc6Q9D4E6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Pabpc6Q9D4E6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpc6Q9D4E6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Pabpc6Q9D4E6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.19■□□□□ 0.82
Pabpc6Q9D4E6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpc6Q9D4E6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
Pabpc6Q9D4E6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpc6Q9D4E6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpc6Q9D4E6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.18■□□□□ 0.82
Pabpc6Q9D4E6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pabpc6Q9D4E6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pabpc6Q9D4E6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pabpc6Q9D4E6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pabpc6Q9D4E6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Pabpc6Q9D4E6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pabpc6Q9D4E6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pabpc6Q9D4E6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pabpc6Q9D4E6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Pabpc6Q9D4E6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.17■□□□□ 0.82
Pabpc6Q9D4E6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Pabpc6Q9D4E6 Gm15375-201ENSMUST00000119510 849 ntBASIC20.17■□□□□ 0.82
Pabpc6Q9D4E6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Pabpc6Q9D4E6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.17■□□□□ 0.82
Pabpc6Q9D4E6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Pabpc6Q9D4E6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pabpc6Q9D4E6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pabpc6Q9D4E6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Pabpc6Q9D4E6 Gm15378-201ENSMUST00000121894 207 ntBASIC20.16■□□□□ 0.82
Pabpc6Q9D4E6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pabpc6Q9D4E6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.16■□□□□ 0.82
Pabpc6Q9D4E6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pabpc6Q9D4E6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pabpc6Q9D4E6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pabpc6Q9D4E6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pabpc6Q9D4E6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pabpc6Q9D4E6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pabpc6Q9D4E6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pabpc6Q9D4E6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pabpc6Q9D4E6 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.16■□□□□ 0.82
Pabpc6Q9D4E6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pabpc6Q9D4E6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pabpc6Q9D4E6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Pabpc6Q9D4E6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pabpc6Q9D4E6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pabpc6Q9D4E6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pabpc6Q9D4E6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pabpc6Q9D4E6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.15■□□□□ 0.82
Pabpc6Q9D4E6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pabpc6Q9D4E6 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pabpc6Q9D4E6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pabpc6Q9D4E6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pabpc6Q9D4E6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pabpc6Q9D4E6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Pabpc6Q9D4E6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pabpc6Q9D4E6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Pabpc6Q9D4E6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pabpc6Q9D4E6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pabpc6Q9D4E6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
Pabpc6Q9D4E6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.14■□□□□ 0.81
Pabpc6Q9D4E6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pabpc6Q9D4E6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pabpc6Q9D4E6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pabpc6Q9D4E6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pabpc6Q9D4E6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms