Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chaf1bQ9D0N7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chaf1bQ9D0N7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chaf1bQ9D0N7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chaf1bQ9D0N7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Chaf1bQ9D0N7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chaf1bQ9D0N7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chaf1bQ9D0N7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chaf1bQ9D0N7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Chaf1bQ9D0N7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Chaf1bQ9D0N7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chaf1bQ9D0N7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Chaf1bQ9D0N7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.05■□□□□ 0.32
Chaf1bQ9D0N7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.05■□□□□ 0.32
Chaf1bQ9D0N7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.05■□□□□ 0.32
Chaf1bQ9D0N7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chaf1bQ9D0N7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chaf1bQ9D0N7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chaf1bQ9D0N7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chaf1bQ9D0N7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chaf1bQ9D0N7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chaf1bQ9D0N7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chaf1bQ9D0N7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Chaf1bQ9D0N7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chaf1bQ9D0N7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Chaf1bQ9D0N7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chaf1bQ9D0N7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chaf1bQ9D0N7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chaf1bQ9D0N7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chaf1bQ9D0N7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
Chaf1bQ9D0N7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chaf1bQ9D0N7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.04■□□□□ 0.32
Chaf1bQ9D0N7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chaf1bQ9D0N7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chaf1bQ9D0N7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chaf1bQ9D0N7 Gm9847-201ENSMUST00000052528 599 ntBASIC17.04■□□□□ 0.32
Chaf1bQ9D0N7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Chaf1bQ9D0N7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chaf1bQ9D0N7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Chaf1bQ9D0N7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chaf1bQ9D0N7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chaf1bQ9D0N7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Chaf1bQ9D0N7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chaf1bQ9D0N7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chaf1bQ9D0N7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chaf1bQ9D0N7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.03■□□□□ 0.32
Chaf1bQ9D0N7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chaf1bQ9D0N7 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.03■□□□□ 0.32
Chaf1bQ9D0N7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.03■□□□□ 0.32
Chaf1bQ9D0N7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Chaf1bQ9D0N7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chaf1bQ9D0N7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chaf1bQ9D0N7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chaf1bQ9D0N7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chaf1bQ9D0N7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chaf1bQ9D0N7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chaf1bQ9D0N7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Chaf1bQ9D0N7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chaf1bQ9D0N7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chaf1bQ9D0N7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chaf1bQ9D0N7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chaf1bQ9D0N7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chaf1bQ9D0N7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.02■□□□□ 0.32
Chaf1bQ9D0N7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chaf1bQ9D0N7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chaf1bQ9D0N7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.02■□□□□ 0.32
Chaf1bQ9D0N7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chaf1bQ9D0N7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chaf1bQ9D0N7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chaf1bQ9D0N7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Chaf1bQ9D0N7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Chaf1bQ9D0N7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1bQ9D0N7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1bQ9D0N7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1bQ9D0N7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Chaf1bQ9D0N7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1bQ9D0N7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1bQ9D0N7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1bQ9D0N7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1bQ9D0N7 Smad6-203ENSMUST00000179458 273 ntBASIC17.01■□□□□ 0.31
Chaf1bQ9D0N7 Gm27801-201ENSMUST00000184174 223 ntBASIC17.01■□□□□ 0.31
Chaf1bQ9D0N7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1bQ9D0N7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Chaf1bQ9D0N7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1bQ9D0N7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1bQ9D0N7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1bQ9D0N7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chaf1bQ9D0N7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1bQ9D0N7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1bQ9D0N7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1bQ9D0N7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1bQ9D0N7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Chaf1bQ9D0N7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Chaf1bQ9D0N7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chaf1bQ9D0N7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17■□□□□ 0.31
Chaf1bQ9D0N7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17■□□□□ 0.31
Chaf1bQ9D0N7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chaf1bQ9D0N7 AC140930.3-201ENSMUST00000222935 274 ntBASIC17■□□□□ 0.31
Chaf1bQ9D0N7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17■□□□□ 0.31
Chaf1bQ9D0N7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms