Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smc3Q9CW03 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smc3Q9CW03 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Smc3Q9CW03 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC21.33■■□□□ 1
Smc3Q9CW03 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smc3Q9CW03 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.32■■□□□ 1
Smc3Q9CW03 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Smc3Q9CW03 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smc3Q9CW03 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC21.32■■□□□ 1
Smc3Q9CW03 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
Smc3Q9CW03 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Smc3Q9CW03 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smc3Q9CW03 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smc3Q9CW03 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.32■■□□□ 1
Smc3Q9CW03 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Smc3Q9CW03 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smc3Q9CW03 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.31■■□□□ 1
Smc3Q9CW03 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Smc3Q9CW03 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smc3Q9CW03 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.31■■□□□ 1
Smc3Q9CW03 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Smc3Q9CW03 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smc3Q9CW03 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.31■■□□□ 1
Smc3Q9CW03 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.31■■□□□ 1
Smc3Q9CW03 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.31■■□□□ 1
Smc3Q9CW03 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smc3Q9CW03 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.31■■□□□ 1
Smc3Q9CW03 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smc3Q9CW03 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smc3Q9CW03 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Smc3Q9CW03 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Smc3Q9CW03 Gm10461-201ENSMUST00000202073 4786 ntBASIC21.31■■□□□ 1
Smc3Q9CW03 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smc3Q9CW03 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Smc3Q9CW03 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smc3Q9CW03 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smc3Q9CW03 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smc3Q9CW03 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.3■■□□□ 1
Smc3Q9CW03 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smc3Q9CW03 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smc3Q9CW03 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Smc3Q9CW03 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smc3Q9CW03 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smc3Q9CW03 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smc3Q9CW03 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smc3Q9CW03 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smc3Q9CW03 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Smc3Q9CW03 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC21.3■■□□□ 1
Smc3Q9CW03 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Smc3Q9CW03 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Smc3Q9CW03 Tgds-204ENSMUST00000228543 1594 ntBASIC21.29■■□□□ 1
Smc3Q9CW03 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.29■■□□□ 1
Smc3Q9CW03 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Smc3Q9CW03 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smc3Q9CW03 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.29■■□□□ 1
Smc3Q9CW03 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smc3Q9CW03 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Smc3Q9CW03 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC21.28■■□□□ 1
Smc3Q9CW03 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Smc3Q9CW03 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smc3Q9CW03 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Smc3Q9CW03 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smc3Q9CW03 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smc3Q9CW03 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smc3Q9CW03 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smc3Q9CW03 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smc3Q9CW03 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smc3Q9CW03 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.28■■□□□ 1
Smc3Q9CW03 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smc3Q9CW03 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smc3Q9CW03 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smc3Q9CW03 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smc3Q9CW03 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.27■■□□□ 1
Smc3Q9CW03 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smc3Q9CW03 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.27■■□□□ 1
Smc3Q9CW03 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.27■■□□□ 1
Smc3Q9CW03 Gm42900-201ENSMUST00000197184 2167 ntBASIC21.27■■□□□ 1
Smc3Q9CW03 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Smc3Q9CW03 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Smc3Q9CW03 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC21.27■□□□□ 0.99
Smc3Q9CW03 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Smc3Q9CW03 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.26■□□□□ 0.99
Smc3Q9CW03 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smc3Q9CW03 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smc3Q9CW03 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smc3Q9CW03 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.26■□□□□ 0.99
Smc3Q9CW03 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.26■□□□□ 0.99
Smc3Q9CW03 Gm42778-201ENSMUST00000199644 553 ntBASIC21.26■□□□□ 0.99
Smc3Q9CW03 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smc3Q9CW03 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Smc3Q9CW03 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smc3Q9CW03 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smc3Q9CW03 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smc3Q9CW03 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smc3Q9CW03 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smc3Q9CW03 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smc3Q9CW03 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smc3Q9CW03 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smc3Q9CW03 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smc3Q9CW03 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms