Protein–RNA interactions for Protein: Q9CQM1

Type III endosome membrane protein TEMP, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQM1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CQM1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.11■□□□□ 0.33
Q9CQM1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CQM1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CQM1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.11■□□□□ 0.33
Q9CQM1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CQM1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Q9CQM1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q9CQM1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Q9CQM1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.1■□□□□ 0.33
Q9CQM1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9CQM1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Q9CQM1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q9CQM1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.1■□□□□ 0.33
Q9CQM1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Q9CQM1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9CQM1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9CQM1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Q9CQM1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Q9CQM1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9CQM1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9CQM1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9CQM1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CQM1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CQM1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CQM1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CQM1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CQM1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.09■□□□□ 0.33
Q9CQM1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.09■□□□□ 0.33
Q9CQM1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.09■□□□□ 0.33
Q9CQM1 Gm6443-201ENSMUST00000203599 874 ntBASIC17.09■□□□□ 0.33
Q9CQM1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CQM1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Q9CQM1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.09■□□□□ 0.33
Q9CQM1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CQM1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CQM1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CQM1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Q9CQM1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Q9CQM1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
Q9CQM1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Q9CQM1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Q9CQM1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Q9CQM1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Q9CQM1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Q9CQM1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Q9CQM1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Q9CQM1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Q9CQM1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Q9CQM1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Q9CQM1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q9CQM1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Q9CQM1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q9CQM1 Gm24589-201ENSMUST00000116692 94 ntBASIC17.07■□□□□ 0.32
Q9CQM1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.07■□□□□ 0.32
Q9CQM1 Gm4974-201ENSMUST00000209974 875 ntBASIC17.07■□□□□ 0.32
Q9CQM1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q9CQM1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Q9CQM1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q9CQM1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q9CQM1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Q9CQM1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Q9CQM1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q9CQM1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q9CQM1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q9CQM1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Q9CQM1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q9CQM1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q9CQM1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q9CQM1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q9CQM1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Q9CQM1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Q9CQM1 Mir3081-201ENSMUST00000175305 84 ntBASIC17.06■□□□□ 0.32
Q9CQM1 Mir1668-201ENSMUST00000184114 107 ntBASIC17.06■□□□□ 0.32
Q9CQM1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Q9CQM1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Q9CQM1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q9CQM1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q9CQM1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q9CQM1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Q9CQM1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Q9CQM1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.05■□□□□ 0.32
Q9CQM1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Q9CQM1 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Q9CQM1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.05■□□□□ 0.32
Q9CQM1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Q9CQM1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q9CQM1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.05■□□□□ 0.32
Q9CQM1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Q9CQM1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q9CQM1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Q9CQM1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q9CQM1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q9CQM1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Q9CQM1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Q9CQM1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.04■□□□□ 0.32
Q9CQM1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Q9CQM1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.04■□□□□ 0.32
Q9CQM1 Gm7791-201ENSMUST00000219066 539 ntBASIC17.04■□□□□ 0.32
Q9CQM1 Gm7370-201ENSMUST00000219471 767 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms