Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trim8Q99PJ2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim8Q99PJ2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim8Q99PJ2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim8Q99PJ2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trim8Q99PJ2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim8Q99PJ2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Trim8Q99PJ2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim8Q99PJ2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim8Q99PJ2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim8Q99PJ2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim8Q99PJ2 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.74■□□□□ 0.43
Trim8Q99PJ2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim8Q99PJ2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim8Q99PJ2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim8Q99PJ2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim8Q99PJ2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim8Q99PJ2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim8Q99PJ2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim8Q99PJ2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim8Q99PJ2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim8Q99PJ2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim8Q99PJ2 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.73■□□□□ 0.43
Trim8Q99PJ2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trim8Q99PJ2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim8Q99PJ2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim8Q99PJ2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim8Q99PJ2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim8Q99PJ2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim8Q99PJ2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim8Q99PJ2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.73■□□□□ 0.43
Trim8Q99PJ2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim8Q99PJ2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim8Q99PJ2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trim8Q99PJ2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim8Q99PJ2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim8Q99PJ2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trim8Q99PJ2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim8Q99PJ2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim8Q99PJ2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim8Q99PJ2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim8Q99PJ2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim8Q99PJ2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trim8Q99PJ2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim8Q99PJ2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim8Q99PJ2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim8Q99PJ2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim8Q99PJ2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim8Q99PJ2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim8Q99PJ2 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.72■□□□□ 0.43
Trim8Q99PJ2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trim8Q99PJ2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Trim8Q99PJ2 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.72■□□□□ 0.43
Trim8Q99PJ2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim8Q99PJ2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim8Q99PJ2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim8Q99PJ2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim8Q99PJ2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim8Q99PJ2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim8Q99PJ2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim8Q99PJ2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.71■□□□□ 0.43
Trim8Q99PJ2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim8Q99PJ2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim8Q99PJ2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.71■□□□□ 0.43
Trim8Q99PJ2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim8Q99PJ2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Trim8Q99PJ2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.71■□□□□ 0.43
Trim8Q99PJ2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim8Q99PJ2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim8Q99PJ2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trim8Q99PJ2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim8Q99PJ2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim8Q99PJ2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim8Q99PJ2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim8Q99PJ2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.7■□□□□ 0.42
Trim8Q99PJ2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim8Q99PJ2 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.7■□□□□ 0.42
Trim8Q99PJ2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim8Q99PJ2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim8Q99PJ2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim8Q99PJ2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim8Q99PJ2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim8Q99PJ2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.7■□□□□ 0.42
Trim8Q99PJ2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim8Q99PJ2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim8Q99PJ2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim8Q99PJ2 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.7■□□□□ 0.42
Trim8Q99PJ2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim8Q99PJ2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trim8Q99PJ2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim8Q99PJ2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim8Q99PJ2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim8Q99PJ2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim8Q99PJ2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim8Q99PJ2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim8Q99PJ2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim8Q99PJ2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim8Q99PJ2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim8Q99PJ2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim8Q99PJ2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms