Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf2ird2Q99NI3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf2ird2Q99NI3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf2ird2Q99NI3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Gtf2ird2Q99NI3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf2ird2Q99NI3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf2ird2Q99NI3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf2ird2Q99NI3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf2ird2Q99NI3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.62■□□□□ 0.57
Gtf2ird2Q99NI3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf2ird2Q99NI3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.62■□□□□ 0.57
Gtf2ird2Q99NI3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Gtf2ird2Q99NI3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf2ird2Q99NI3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf2ird2Q99NI3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf2ird2Q99NI3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf2ird2Q99NI3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Gtf2ird2Q99NI3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf2ird2Q99NI3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf2ird2Q99NI3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf2ird2Q99NI3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf2ird2Q99NI3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf2ird2Q99NI3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf2ird2Q99NI3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf2ird2Q99NI3 Gm22240-201ENSMUST00000175225 82 ntBASIC18.61■□□□□ 0.57
Gtf2ird2Q99NI3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Gtf2ird2Q99NI3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf2ird2Q99NI3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf2ird2Q99NI3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf2ird2Q99NI3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf2ird2Q99NI3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf2ird2Q99NI3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf2ird2Q99NI3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf2ird2Q99NI3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf2ird2Q99NI3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf2ird2Q99NI3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf2ird2Q99NI3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
Gtf2ird2Q99NI3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf2ird2Q99NI3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf2ird2Q99NI3 Gm11249-201ENSMUST00000117071 859 ntBASIC18.6■□□□□ 0.57
Gtf2ird2Q99NI3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf2ird2Q99NI3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf2ird2Q99NI3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf2ird2Q99NI3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.6■□□□□ 0.57
Gtf2ird2Q99NI3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf2ird2Q99NI3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf2ird2Q99NI3 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.6■□□□□ 0.57
Gtf2ird2Q99NI3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf2ird2Q99NI3 Grk6-206ENSMUST00000224995 2971 ntBASIC18.6■□□□□ 0.57
Gtf2ird2Q99NI3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gtf2ird2Q99NI3 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.59■□□□□ 0.57
Gtf2ird2Q99NI3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gtf2ird2Q99NI3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gtf2ird2Q99NI3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Gtf2ird2Q99NI3 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.59■□□□□ 0.57
Gtf2ird2Q99NI3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gtf2ird2Q99NI3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gtf2ird2Q99NI3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gtf2ird2Q99NI3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Gtf2ird2Q99NI3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gtf2ird2Q99NI3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gtf2ird2Q99NI3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Gtf2ird2Q99NI3 Gm18666-201ENSMUST00000190039 958 ntBASIC18.58■□□□□ 0.56
Gtf2ird2Q99NI3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.58■□□□□ 0.56
Gtf2ird2Q99NI3 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.58■□□□□ 0.56
Gtf2ird2Q99NI3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gtf2ird2Q99NI3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gtf2ird2Q99NI3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gtf2ird2Q99NI3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gtf2ird2Q99NI3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gtf2ird2Q99NI3 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.57■□□□□ 0.56
Gtf2ird2Q99NI3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gtf2ird2Q99NI3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gtf2ird2Q99NI3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gtf2ird2Q99NI3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gtf2ird2Q99NI3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gtf2ird2Q99NI3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Gtf2ird2Q99NI3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gtf2ird2Q99NI3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Gtf2ird2Q99NI3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gtf2ird2Q99NI3 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.57■□□□□ 0.56
Gtf2ird2Q99NI3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gtf2ird2Q99NI3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.57■□□□□ 0.56
Gtf2ird2Q99NI3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gtf2ird2Q99NI3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gtf2ird2Q99NI3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.56■□□□□ 0.56
Gtf2ird2Q99NI3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Gtf2ird2Q99NI3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gtf2ird2Q99NI3 Gm11927-201ENSMUST00000118472 759 ntBASIC18.56■□□□□ 0.56
Gtf2ird2Q99NI3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gtf2ird2Q99NI3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Gtf2ird2Q99NI3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gtf2ird2Q99NI3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gtf2ird2Q99NI3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gtf2ird2Q99NI3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gtf2ird2Q99NI3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Gtf2ird2Q99NI3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gtf2ird2Q99NI3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gtf2ird2Q99NI3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gtf2ird2Q99NI3 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms