Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Msh4Q99MT2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.65■□□□□ 0.42
Msh4Q99MT2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh4Q99MT2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Msh4Q99MT2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
Msh4Q99MT2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.65■□□□□ 0.42
Msh4Q99MT2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.65■□□□□ 0.42
Msh4Q99MT2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Msh4Q99MT2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh4Q99MT2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh4Q99MT2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Msh4Q99MT2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Msh4Q99MT2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh4Q99MT2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh4Q99MT2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh4Q99MT2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh4Q99MT2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msh4Q99MT2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Msh4Q99MT2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Msh4Q99MT2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Msh4Q99MT2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Msh4Q99MT2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Msh4Q99MT2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh4Q99MT2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh4Q99MT2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Msh4Q99MT2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Msh4Q99MT2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Msh4Q99MT2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.64■□□□□ 0.41
Msh4Q99MT2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Msh4Q99MT2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh4Q99MT2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Msh4Q99MT2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh4Q99MT2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh4Q99MT2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Msh4Q99MT2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Msh4Q99MT2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Msh4Q99MT2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Msh4Q99MT2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh4Q99MT2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh4Q99MT2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh4Q99MT2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh4Q99MT2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh4Q99MT2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh4Q99MT2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Msh4Q99MT2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Msh4Q99MT2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Msh4Q99MT2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Msh4Q99MT2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.63■□□□□ 0.41
Msh4Q99MT2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh4Q99MT2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh4Q99MT2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Msh4Q99MT2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh4Q99MT2 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.63■□□□□ 0.41
Msh4Q99MT2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh4Q99MT2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Msh4Q99MT2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh4Q99MT2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh4Q99MT2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Msh4Q99MT2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh4Q99MT2 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.63■□□□□ 0.41
Msh4Q99MT2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Msh4Q99MT2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh4Q99MT2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Msh4Q99MT2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh4Q99MT2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh4Q99MT2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.62■□□□□ 0.41
Msh4Q99MT2 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.62■□□□□ 0.41
Msh4Q99MT2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh4Q99MT2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh4Q99MT2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Msh4Q99MT2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Msh4Q99MT2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh4Q99MT2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Msh4Q99MT2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh4Q99MT2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh4Q99MT2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh4Q99MT2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh4Q99MT2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Msh4Q99MT2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Msh4Q99MT2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh4Q99MT2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh4Q99MT2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Msh4Q99MT2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.61■□□□□ 0.41
Msh4Q99MT2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.61■□□□□ 0.41
Msh4Q99MT2 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.61■□□□□ 0.41
Msh4Q99MT2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh4Q99MT2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh4Q99MT2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh4Q99MT2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.61■□□□□ 0.41
Msh4Q99MT2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Msh4Q99MT2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.61■□□□□ 0.41
Msh4Q99MT2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh4Q99MT2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh4Q99MT2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Msh4Q99MT2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh4Q99MT2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh4Q99MT2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.6■□□□□ 0.41
Msh4Q99MT2 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.6■□□□□ 0.41
Msh4Q99MT2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Msh4Q99MT2 Gm5408-201ENSMUST00000197998 747 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms