Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx6-1Q99MA9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx6-1Q99MA9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Nkx6-1Q99MA9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx6-1Q99MA9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx6-1Q99MA9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx6-1Q99MA9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx6-1Q99MA9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Nkx6-1Q99MA9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx6-1Q99MA9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx6-1Q99MA9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx6-1Q99MA9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx6-1Q99MA9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx6-1Q99MA9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.98■□□□□ 0.31
Nkx6-1Q99MA9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.98■□□□□ 0.31
Nkx6-1Q99MA9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Nkx6-1Q99MA9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.97■□□□□ 0.31
Nkx6-1Q99MA9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx6-1Q99MA9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx6-1Q99MA9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Nkx6-1Q99MA9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Nkx6-1Q99MA9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Nkx6-1Q99MA9 Gm12085-201ENSMUST00000119263 940 ntBASIC16.97■□□□□ 0.31
Nkx6-1Q99MA9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx6-1Q99MA9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx6-1Q99MA9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx6-1Q99MA9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Nkx6-1Q99MA9 Ank2-226ENSMUST00000189368 339 ntBASIC16.97■□□□□ 0.31
Nkx6-1Q99MA9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.97■□□□□ 0.31
Nkx6-1Q99MA9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx6-1Q99MA9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx6-1Q99MA9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx6-1Q99MA9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Nkx6-1Q99MA9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx6-1Q99MA9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx6-1Q99MA9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx6-1Q99MA9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx6-1Q99MA9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.96■□□□□ 0.31
Nkx6-1Q99MA9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Nkx6-1Q99MA9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Nkx6-1Q99MA9 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.96■□□□□ 0.31
Nkx6-1Q99MA9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx6-1Q99MA9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx6-1Q99MA9 Mir5130-201ENSMUST00000175160 84 ntBASIC16.96■□□□□ 0.31
Nkx6-1Q99MA9 Gm27463-201ENSMUST00000183569 57 ntBASIC16.96■□□□□ 0.31
Nkx6-1Q99MA9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.96■□□□□ 0.31
Nkx6-1Q99MA9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Nkx6-1Q99MA9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Nkx6-1Q99MA9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx6-1Q99MA9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx6-1Q99MA9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx6-1Q99MA9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx6-1Q99MA9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nkx6-1Q99MA9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
Nkx6-1Q99MA9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx6-1Q99MA9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx6-1Q99MA9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.95■□□□□ 0.3
Nkx6-1Q99MA9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx6-1Q99MA9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.95■□□□□ 0.3
Nkx6-1Q99MA9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx6-1Q99MA9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Nkx6-1Q99MA9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx6-1Q99MA9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx6-1Q99MA9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx6-1Q99MA9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Nkx6-1Q99MA9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx6-1Q99MA9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx6-1Q99MA9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Nkx6-1Q99MA9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx6-1Q99MA9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx6-1Q99MA9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Nkx6-1Q99MA9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx6-1Q99MA9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Nkx6-1Q99MA9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx6-1Q99MA9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx6-1Q99MA9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.94■□□□□ 0.3
Nkx6-1Q99MA9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
Nkx6-1Q99MA9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx6-1Q99MA9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx6-1Q99MA9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx6-1Q99MA9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx6-1Q99MA9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx6-1Q99MA9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Nkx6-1Q99MA9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx6-1Q99MA9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx6-1Q99MA9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.94■□□□□ 0.3
Nkx6-1Q99MA9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Nkx6-1Q99MA9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx6-1Q99MA9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Nkx6-1Q99MA9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx6-1Q99MA9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx6-1Q99MA9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx6-1Q99MA9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx6-1Q99MA9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx6-1Q99MA9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.93■□□□□ 0.3
Nkx6-1Q99MA9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx6-1Q99MA9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.93■□□□□ 0.3
Nkx6-1Q99MA9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx6-1Q99MA9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx6-1Q99MA9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms