Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdk5rap3Q99LM2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdk5rap3Q99LM2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cdk5rap3Q99LM2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdk5rap3Q99LM2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Cdk5rap3Q99LM2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdk5rap3Q99LM2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdk5rap3Q99LM2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap3Q99LM2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap3Q99LM2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap3Q99LM2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap3Q99LM2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Cdk5rap3Q99LM2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap3Q99LM2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.8■□□□□ 0.6
Cdk5rap3Q99LM2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap3Q99LM2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap3Q99LM2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap3Q99LM2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap3Q99LM2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap3Q99LM2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap3Q99LM2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap3Q99LM2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Cdk5rap3Q99LM2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap3Q99LM2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap3Q99LM2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap3Q99LM2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap3Q99LM2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap3Q99LM2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cdk5rap3Q99LM2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
Cdk5rap3Q99LM2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap3Q99LM2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cdk5rap3Q99LM2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap3Q99LM2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap3Q99LM2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap3Q99LM2 Tgds-204ENSMUST00000228543 1594 ntBASIC18.79■□□□□ 0.6
Cdk5rap3Q99LM2 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.79■□□□□ 0.6
Cdk5rap3Q99LM2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap3Q99LM2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap3Q99LM2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk5rap3Q99LM2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cdk5rap3Q99LM2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk5rap3Q99LM2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk5rap3Q99LM2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.78■□□□□ 0.6
Cdk5rap3Q99LM2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk5rap3Q99LM2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk5rap3Q99LM2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk5rap3Q99LM2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk5rap3Q99LM2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cdk5rap3Q99LM2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.77■□□□□ 0.6
Cdk5rap3Q99LM2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap3Q99LM2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap3Q99LM2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap3Q99LM2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap3Q99LM2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Cdk5rap3Q99LM2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Cdk5rap3Q99LM2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.77■□□□□ 0.6
Cdk5rap3Q99LM2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cdk5rap3Q99LM2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap3Q99LM2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap3Q99LM2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap3Q99LM2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdk5rap3Q99LM2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdk5rap3Q99LM2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdk5rap3Q99LM2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdk5rap3Q99LM2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdk5rap3Q99LM2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdk5rap3Q99LM2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdk5rap3Q99LM2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdk5rap3Q99LM2 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.75■□□□□ 0.59
Cdk5rap3Q99LM2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk5rap3Q99LM2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cdk5rap3Q99LM2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Cdk5rap3Q99LM2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk5rap3Q99LM2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.75■□□□□ 0.59
Cdk5rap3Q99LM2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk5rap3Q99LM2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk5rap3Q99LM2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk5rap3Q99LM2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk5rap3Q99LM2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cdk5rap3Q99LM2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Cdk5rap3Q99LM2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk5rap3Q99LM2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.74■□□□□ 0.59
Cdk5rap3Q99LM2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk5rap3Q99LM2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.74■□□□□ 0.59
Cdk5rap3Q99LM2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.74■□□□□ 0.59
Cdk5rap3Q99LM2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Cdk5rap3Q99LM2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk5rap3Q99LM2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.74■□□□□ 0.59
Cdk5rap3Q99LM2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk5rap3Q99LM2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk5rap3Q99LM2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.74■□□□□ 0.59
Cdk5rap3Q99LM2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk5rap3Q99LM2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk5rap3Q99LM2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk5rap3Q99LM2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cdk5rap3Q99LM2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk5rap3Q99LM2 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.73■□□□□ 0.59
Cdk5rap3Q99LM2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdk5rap3Q99LM2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdk5rap3Q99LM2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms