Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cstf1Q99LC2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cstf1Q99LC2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cstf1Q99LC2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cstf1Q99LC2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cstf1Q99LC2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cstf1Q99LC2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cstf1Q99LC2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cstf1Q99LC2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cstf1Q99LC2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cstf1Q99LC2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cstf1Q99LC2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.08■□□□□ 0.48
Cstf1Q99LC2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cstf1Q99LC2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.08■□□□□ 0.48
Cstf1Q99LC2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cstf1Q99LC2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cstf1Q99LC2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cstf1Q99LC2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Cstf1Q99LC2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cstf1Q99LC2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.08■□□□□ 0.48
Cstf1Q99LC2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cstf1Q99LC2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cstf1Q99LC2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.07■□□□□ 0.48
Cstf1Q99LC2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.07■□□□□ 0.48
Cstf1Q99LC2 Gm33142-201ENSMUST00000193913 867 ntBASIC18.07■□□□□ 0.48
Cstf1Q99LC2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cstf1Q99LC2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cstf1Q99LC2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.07■□□□□ 0.48
Cstf1Q99LC2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cstf1Q99LC2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cstf1Q99LC2 Gm12382-201ENSMUST00000122005 922 ntBASIC18.06■□□□□ 0.48
Cstf1Q99LC2 Gm6345-202ENSMUST00000180900 204 ntBASIC18.06■□□□□ 0.48
Cstf1Q99LC2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.06■□□□□ 0.48
Cstf1Q99LC2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cstf1Q99LC2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cstf1Q99LC2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cstf1Q99LC2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cstf1Q99LC2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cstf1Q99LC2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cstf1Q99LC2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.05■□□□□ 0.48
Cstf1Q99LC2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Cstf1Q99LC2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cstf1Q99LC2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cstf1Q99LC2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cstf1Q99LC2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cstf1Q99LC2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cstf1Q99LC2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cstf1Q99LC2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cstf1Q99LC2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cstf1Q99LC2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cstf1Q99LC2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cstf1Q99LC2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.05■□□□□ 0.48
Cstf1Q99LC2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cstf1Q99LC2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Cstf1Q99LC2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cstf1Q99LC2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Cstf1Q99LC2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cstf1Q99LC2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cstf1Q99LC2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cstf1Q99LC2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cstf1Q99LC2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cstf1Q99LC2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cstf1Q99LC2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cstf1Q99LC2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cstf1Q99LC2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Cstf1Q99LC2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.04■□□□□ 0.48
Cstf1Q99LC2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cstf1Q99LC2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cstf1Q99LC2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cstf1Q99LC2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cstf1Q99LC2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cstf1Q99LC2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cstf1Q99LC2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cstf1Q99LC2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cstf1Q99LC2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cstf1Q99LC2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cstf1Q99LC2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cstf1Q99LC2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cstf1Q99LC2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cstf1Q99LC2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cstf1Q99LC2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cstf1Q99LC2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cstf1Q99LC2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cstf1Q99LC2 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.03■□□□□ 0.48
Cstf1Q99LC2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cstf1Q99LC2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cstf1Q99LC2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cstf1Q99LC2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cstf1Q99LC2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cstf1Q99LC2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cstf1Q99LC2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cstf1Q99LC2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cstf1Q99LC2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cstf1Q99LC2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cstf1Q99LC2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cstf1Q99LC2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cstf1Q99LC2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cstf1Q99LC2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cstf1Q99LC2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cstf1Q99LC2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms