Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Smc1bQ920F6 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.83■□□□□ 0.92
Smc1bQ920F6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc1bQ920F6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smc1bQ920F6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc1bQ920F6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc1bQ920F6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Smc1bQ920F6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc1bQ920F6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smc1bQ920F6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Smc1bQ920F6 Gm6433-201ENSMUST00000118634 875 ntBASIC20.82■□□□□ 0.92
Smc1bQ920F6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.82■□□□□ 0.92
Smc1bQ920F6 Gm10231-201ENSMUST00000181584 441 ntBASIC20.82■□□□□ 0.92
Smc1bQ920F6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc1bQ920F6 Gm10175-202ENSMUST00000208752 441 ntBASIC20.82■□□□□ 0.92
Smc1bQ920F6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc1bQ920F6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smc1bQ920F6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc1bQ920F6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc1bQ920F6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc1bQ920F6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc1bQ920F6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Smc1bQ920F6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc1bQ920F6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smc1bQ920F6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc1bQ920F6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.81■□□□□ 0.92
Smc1bQ920F6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smc1bQ920F6 Mir5122-201ENSMUST00000175004 89 ntBASIC20.81■□□□□ 0.92
Smc1bQ920F6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc1bQ920F6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Smc1bQ920F6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.81■□□□□ 0.92
Smc1bQ920F6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.81■□□□□ 0.92
Smc1bQ920F6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc1bQ920F6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc1bQ920F6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.81■□□□□ 0.92
Smc1bQ920F6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Smc1bQ920F6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Smc1bQ920F6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc1bQ920F6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc1bQ920F6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Smc1bQ920F6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc1bQ920F6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc1bQ920F6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Smc1bQ920F6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smc1bQ920F6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc1bQ920F6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.8■□□□□ 0.92
Smc1bQ920F6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc1bQ920F6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Smc1bQ920F6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
Smc1bQ920F6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc1bQ920F6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smc1bQ920F6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Smc1bQ920F6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Smc1bQ920F6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc1bQ920F6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smc1bQ920F6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc1bQ920F6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Smc1bQ920F6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc1bQ920F6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc1bQ920F6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.79■□□□□ 0.92
Smc1bQ920F6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.79■□□□□ 0.92
Smc1bQ920F6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Smc1bQ920F6 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.79■□□□□ 0.92
Smc1bQ920F6 Gm43799-201ENSMUST00000201845 579 ntBASIC20.79■□□□□ 0.92
Smc1bQ920F6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc1bQ920F6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc1bQ920F6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc1bQ920F6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc1bQ920F6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Smc1bQ920F6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc1bQ920F6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
Smc1bQ920F6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc1bQ920F6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc1bQ920F6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc1bQ920F6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smc1bQ920F6 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.78■□□□□ 0.92
Smc1bQ920F6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.78■□□□□ 0.92
Smc1bQ920F6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smc1bQ920F6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smc1bQ920F6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smc1bQ920F6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Smc1bQ920F6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Smc1bQ920F6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc1bQ920F6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc1bQ920F6 Rarb-207ENSMUST00000225921 2756 ntBASIC20.78■□□□□ 0.92
Smc1bQ920F6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Smc1bQ920F6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Smc1bQ920F6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Smc1bQ920F6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc1bQ920F6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smc1bQ920F6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc1bQ920F6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc1bQ920F6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc1bQ920F6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Smc1bQ920F6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc1bQ920F6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc1bQ920F6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Smc1bQ920F6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Smc1bQ920F6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc1bQ920F6 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms