Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb6Q91XZ4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Pcdhb6Q91XZ4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhb6Q91XZ4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb6Q91XZ4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb6Q91XZ4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhb6Q91XZ4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb6Q91XZ4 Gm44549-201ENSMUST00000208351 577 ntBASIC18.64■□□□□ 0.57
Pcdhb6Q91XZ4 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.64■□□□□ 0.57
Pcdhb6Q91XZ4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.64■□□□□ 0.57
Pcdhb6Q91XZ4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdhb6Q91XZ4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb6Q91XZ4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb6Q91XZ4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb6Q91XZ4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.64■□□□□ 0.57
Pcdhb6Q91XZ4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb6Q91XZ4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhb6Q91XZ4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb6Q91XZ4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb6Q91XZ4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.63■□□□□ 0.57
Pcdhb6Q91XZ4 Rab3c-203ENSMUST00000224180 967 ntBASIC18.63■□□□□ 0.57
Pcdhb6Q91XZ4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb6Q91XZ4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb6Q91XZ4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb6Q91XZ4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb6Q91XZ4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb6Q91XZ4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhb6Q91XZ4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb6Q91XZ4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdhb6Q91XZ4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb6Q91XZ4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb6Q91XZ4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb6Q91XZ4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb6Q91XZ4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb6Q91XZ4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb6Q91XZ4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb6Q91XZ4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pcdhb6Q91XZ4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb6Q91XZ4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb6Q91XZ4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb6Q91XZ4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.61■□□□□ 0.57
Pcdhb6Q91XZ4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb6Q91XZ4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb6Q91XZ4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb6Q91XZ4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
Pcdhb6Q91XZ4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb6Q91XZ4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb6Q91XZ4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb6Q91XZ4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb6Q91XZ4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb6Q91XZ4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pcdhb6Q91XZ4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb6Q91XZ4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.6■□□□□ 0.57
Pcdhb6Q91XZ4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.6■□□□□ 0.57
Pcdhb6Q91XZ4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb6Q91XZ4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pcdhb6Q91XZ4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb6Q91XZ4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb6Q91XZ4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb6Q91XZ4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb6Q91XZ4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb6Q91XZ4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhb6Q91XZ4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb6Q91XZ4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb6Q91XZ4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb6Q91XZ4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb6Q91XZ4 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.59■□□□□ 0.57
Pcdhb6Q91XZ4 Gm2399-201ENSMUST00000104944 225 ntBASIC18.59■□□□□ 0.57
Pcdhb6Q91XZ4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb6Q91XZ4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.59■□□□□ 0.57
Pcdhb6Q91XZ4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Pcdhb6Q91XZ4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb6Q91XZ4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb6Q91XZ4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms