Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhgb4Q91XX6 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.16■□□□□ 0.66
Pcdhgb4Q91XX6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdhgb4Q91XX6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhgb4Q91XX6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhgb4Q91XX6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhgb4Q91XX6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.16■□□□□ 0.66
Pcdhgb4Q91XX6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhgb4Q91XX6 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhgb4Q91XX6 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.16■□□□□ 0.66
Pcdhgb4Q91XX6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhgb4Q91XX6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhgb4Q91XX6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhgb4Q91XX6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhgb4Q91XX6 Tgds-204ENSMUST00000228543 1594 ntBASIC19.15■□□□□ 0.66
Pcdhgb4Q91XX6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Pcdhgb4Q91XX6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhgb4Q91XX6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhgb4Q91XX6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhgb4Q91XX6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhgb4Q91XX6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.15■□□□□ 0.66
Pcdhgb4Q91XX6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.15■□□□□ 0.66
Pcdhgb4Q91XX6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhgb4Q91XX6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhgb4Q91XX6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Pcdhgb4Q91XX6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhgb4Q91XX6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdhgb4Q91XX6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdhgb4Q91XX6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Pcdhgb4Q91XX6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhgb4Q91XX6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhgb4Q91XX6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhgb4Q91XX6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhgb4Q91XX6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Pcdhgb4Q91XX6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhgb4Q91XX6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pcdhgb4Q91XX6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdhgb4Q91XX6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.14■□□□□ 0.65
Pcdhgb4Q91XX6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.14■□□□□ 0.65
Pcdhgb4Q91XX6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhgb4Q91XX6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhgb4Q91XX6 Gm6365-201ENSMUST00000054711 744 ntBASIC19.14■□□□□ 0.65
Pcdhgb4Q91XX6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhgb4Q91XX6 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhgb4Q91XX6 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhgb4Q91XX6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhgb4Q91XX6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhgb4Q91XX6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.14■□□□□ 0.65
Pcdhgb4Q91XX6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhgb4Q91XX6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhgb4Q91XX6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhgb4Q91XX6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhgb4Q91XX6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhgb4Q91XX6 Gm8495-201ENSMUST00000188740 694 ntBASIC19.13■□□□□ 0.65
Pcdhgb4Q91XX6 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhgb4Q91XX6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhgb4Q91XX6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhgb4Q91XX6 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.13■□□□□ 0.65
Pcdhgb4Q91XX6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhgb4Q91XX6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pcdhgb4Q91XX6 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhgb4Q91XX6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhgb4Q91XX6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhgb4Q91XX6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhgb4Q91XX6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhgb4Q91XX6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.12■□□□□ 0.65
Pcdhgb4Q91XX6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhgb4Q91XX6 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhgb4Q91XX6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pcdhgb4Q91XX6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pcdhgb4Q91XX6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pcdhgb4Q91XX6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhgb4Q91XX6 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.11■□□□□ 0.65
Pcdhgb4Q91XX6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgb4Q91XX6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgb4Q91XX6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgb4Q91XX6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgb4Q91XX6 Gm22325-201ENSMUST00000158904 308 ntBASIC19.11■□□□□ 0.65
Pcdhgb4Q91XX6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.11■□□□□ 0.65
Pcdhgb4Q91XX6 Gm15823-201ENSMUST00000064305 670 ntBASIC19.11■□□□□ 0.65
Pcdhgb4Q91XX6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgb4Q91XX6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgb4Q91XX6 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgb4Q91XX6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgb4Q91XX6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Pcdhgb4Q91XX6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgb4Q91XX6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhgb4Q91XX6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhgb4Q91XX6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdhgb4Q91XX6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdhgb4Q91XX6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Pcdhgb4Q91XX6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhgb4Q91XX6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Pcdhgb4Q91XX6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.1■□□□□ 0.65
Pcdhgb4Q91XX6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Pcdhgb4Q91XX6 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Pcdhgb4Q91XX6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhgb4Q91XX6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Pcdhgb4Q91XX6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhgb4Q91XX6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms