Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgc3Q91XX1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhgc3Q91XX1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhgc3Q91XX1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgc3Q91XX1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgc3Q91XX1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.11■□□□□ 0.33
Pcdhgc3Q91XX1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdhgc3Q91XX1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgc3Q91XX1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgc3Q91XX1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgc3Q91XX1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdhgc3Q91XX1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgc3Q91XX1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhgc3Q91XX1 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.11■□□□□ 0.33
Pcdhgc3Q91XX1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgc3Q91XX1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgc3Q91XX1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc3Q91XX1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.1■□□□□ 0.33
Pcdhgc3Q91XX1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc3Q91XX1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc3Q91XX1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc3Q91XX1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc3Q91XX1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhgc3Q91XX1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc3Q91XX1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcdhgc3Q91XX1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc3Q91XX1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcdhgc3Q91XX1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc3Q91XX1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhgc3Q91XX1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc3Q91XX1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc3Q91XX1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhgc3Q91XX1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc3Q91XX1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc3Q91XX1 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.09■□□□□ 0.33
Pcdhgc3Q91XX1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc3Q91XX1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc3Q91XX1 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.09■□□□□ 0.33
Pcdhgc3Q91XX1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc3Q91XX1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc3Q91XX1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc3Q91XX1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc3Q91XX1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc3Q91XX1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.09■□□□□ 0.33
Pcdhgc3Q91XX1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.09■□□□□ 0.33
Pcdhgc3Q91XX1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhgc3Q91XX1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhgc3Q91XX1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc3Q91XX1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhgc3Q91XX1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc3Q91XX1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc3Q91XX1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc3Q91XX1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc3Q91XX1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc3Q91XX1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhgc3Q91XX1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhgc3Q91XX1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhgc3Q91XX1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhgc3Q91XX1 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.08■□□□□ 0.33
Pcdhgc3Q91XX1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhgc3Q91XX1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhgc3Q91XX1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Pcdhgc3Q91XX1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhgc3Q91XX1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgc3Q91XX1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgc3Q91XX1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdhgc3Q91XX1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgc3Q91XX1 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.08■□□□□ 0.32
Pcdhgc3Q91XX1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgc3Q91XX1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgc3Q91XX1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhgc3Q91XX1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.08■□□□□ 0.32
Pcdhgc3Q91XX1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgc3Q91XX1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgc3Q91XX1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgc3Q91XX1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhgc3Q91XX1 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.07■□□□□ 0.32
Pcdhgc3Q91XX1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhgc3Q91XX1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgc3Q91XX1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgc3Q91XX1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgc3Q91XX1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgc3Q91XX1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgc3Q91XX1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pcdhgc3Q91XX1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgc3Q91XX1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgc3Q91XX1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgc3Q91XX1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgc3Q91XX1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgc3Q91XX1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhgc3Q91XX1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgc3Q91XX1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhgc3Q91XX1 Tgds-204ENSMUST00000228543 1594 ntBASIC17.06■□□□□ 0.32
Pcdhgc3Q91XX1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgc3Q91XX1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgc3Q91XX1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgc3Q91XX1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgc3Q91XX1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgc3Q91XX1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhgc3Q91XX1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms