Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lims2Q91XD2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lims2Q91XD2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lims2Q91XD2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Lims2Q91XD2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Lims2Q91XD2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lims2Q91XD2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lims2Q91XD2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lims2Q91XD2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.59■□□□□ 0.57
Lims2Q91XD2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lims2Q91XD2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lims2Q91XD2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Lims2Q91XD2 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.59■□□□□ 0.57
Lims2Q91XD2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lims2Q91XD2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lims2Q91XD2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Lims2Q91XD2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Lims2Q91XD2 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.58■□□□□ 0.56
Lims2Q91XD2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Lims2Q91XD2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lims2Q91XD2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lims2Q91XD2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Lims2Q91XD2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lims2Q91XD2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lims2Q91XD2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lims2Q91XD2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Lims2Q91XD2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Lims2Q91XD2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Lims2Q91XD2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.58■□□□□ 0.56
Lims2Q91XD2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lims2Q91XD2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lims2Q91XD2 Gm37292-201ENSMUST00000192062 758 ntBASIC18.57■□□□□ 0.56
Lims2Q91XD2 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.57■□□□□ 0.56
Lims2Q91XD2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lims2Q91XD2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lims2Q91XD2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.57■□□□□ 0.56
Lims2Q91XD2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lims2Q91XD2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Lims2Q91XD2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Lims2Q91XD2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lims2Q91XD2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lims2Q91XD2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lims2Q91XD2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lims2Q91XD2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lims2Q91XD2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lims2Q91XD2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Lims2Q91XD2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.56■□□□□ 0.56
Lims2Q91XD2 Gm42545-201ENSMUST00000202755 922 ntBASIC18.56■□□□□ 0.56
Lims2Q91XD2 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.56■□□□□ 0.56
Lims2Q91XD2 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.56■□□□□ 0.56
Lims2Q91XD2 Gm10812-201ENSMUST00000099864 546 ntBASIC18.56■□□□□ 0.56
Lims2Q91XD2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lims2Q91XD2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lims2Q91XD2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lims2Q91XD2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lims2Q91XD2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lims2Q91XD2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lims2Q91XD2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lims2Q91XD2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.55■□□□□ 0.56
Lims2Q91XD2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.55■□□□□ 0.56
Lims2Q91XD2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.55■□□□□ 0.56
Lims2Q91XD2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Lims2Q91XD2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lims2Q91XD2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lims2Q91XD2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lims2Q91XD2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lims2Q91XD2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.55■□□□□ 0.56
Lims2Q91XD2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lims2Q91XD2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lims2Q91XD2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lims2Q91XD2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lims2Q91XD2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lims2Q91XD2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lims2Q91XD2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lims2Q91XD2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.54■□□□□ 0.56
Lims2Q91XD2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.54■□□□□ 0.56
Lims2Q91XD2 Gm43183-201ENSMUST00000200632 547 ntBASIC18.54■□□□□ 0.56
Lims2Q91XD2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Lims2Q91XD2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lims2Q91XD2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lims2Q91XD2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lims2Q91XD2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Lims2Q91XD2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lims2Q91XD2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lims2Q91XD2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lims2Q91XD2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lims2Q91XD2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lims2Q91XD2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Lims2Q91XD2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lims2Q91XD2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lims2Q91XD2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.53■□□□□ 0.56
Lims2Q91XD2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lims2Q91XD2 Gm11643-201ENSMUST00000119578 864 ntBASIC18.53■□□□□ 0.56
Lims2Q91XD2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.53■□□□□ 0.56
Lims2Q91XD2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lims2Q91XD2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lims2Q91XD2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lims2Q91XD2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Lims2Q91XD2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lims2Q91XD2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms