Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx41Q91VN6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx41Q91VN6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx41Q91VN6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.75■□□□□ 0.91
Ddx41Q91VN6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx41Q91VN6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx41Q91VN6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Ddx41Q91VN6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx41Q91VN6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx41Q91VN6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx41Q91VN6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.75■□□□□ 0.91
Ddx41Q91VN6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.75■□□□□ 0.91
Ddx41Q91VN6 Gm10812-201ENSMUST00000099864 546 ntBASIC20.75■□□□□ 0.91
Ddx41Q91VN6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx41Q91VN6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx41Q91VN6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Ddx41Q91VN6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx41Q91VN6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx41Q91VN6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx41Q91VN6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.74■□□□□ 0.91
Ddx41Q91VN6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx41Q91VN6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx41Q91VN6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx41Q91VN6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx41Q91VN6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx41Q91VN6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx41Q91VN6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx41Q91VN6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx41Q91VN6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx41Q91VN6 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.73■□□□□ 0.91
Ddx41Q91VN6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.73■□□□□ 0.91
Ddx41Q91VN6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx41Q91VN6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.73■□□□□ 0.91
Ddx41Q91VN6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx41Q91VN6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.73■□□□□ 0.91
Ddx41Q91VN6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
Ddx41Q91VN6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx41Q91VN6 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.73■□□□□ 0.91
Ddx41Q91VN6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx41Q91VN6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx41Q91VN6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Ddx41Q91VN6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.72■□□□□ 0.91
Ddx41Q91VN6 Gm5643-201ENSMUST00000117081 966 ntBASIC20.72■□□□□ 0.91
Ddx41Q91VN6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Ddx41Q91VN6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx41Q91VN6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx41Q91VN6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx41Q91VN6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ddx41Q91VN6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx41Q91VN6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx41Q91VN6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ddx41Q91VN6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx41Q91VN6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx41Q91VN6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx41Q91VN6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx41Q91VN6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx41Q91VN6 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx41Q91VN6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ddx41Q91VN6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ddx41Q91VN6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ddx41Q91VN6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx41Q91VN6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx41Q91VN6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx41Q91VN6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.7■□□□□ 0.91
Ddx41Q91VN6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx41Q91VN6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx41Q91VN6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx41Q91VN6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx41Q91VN6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.7■□□□□ 0.9
Ddx41Q91VN6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.7■□□□□ 0.9
Ddx41Q91VN6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx41Q91VN6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx41Q91VN6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx41Q91VN6 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.69■□□□□ 0.9
Ddx41Q91VN6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx41Q91VN6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ddx41Q91VN6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx41Q91VN6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.69■□□□□ 0.9
Ddx41Q91VN6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx41Q91VN6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx41Q91VN6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ddx41Q91VN6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx41Q91VN6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx41Q91VN6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ddx41Q91VN6 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx41Q91VN6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx41Q91VN6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ddx41Q91VN6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx41Q91VN6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx41Q91VN6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx41Q91VN6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx41Q91VN6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx41Q91VN6 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.68■□□□□ 0.9
Ddx41Q91VN6 Gm11249-201ENSMUST00000117071 859 ntBASIC20.68■□□□□ 0.9
Ddx41Q91VN6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx41Q91VN6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx41Q91VN6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx41Q91VN6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.68■□□□□ 0.9
Ddx41Q91VN6 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx41Q91VN6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms