Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.61■□□□□ 0.09
Tram1Q91V04 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tram1Q91V04 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.61■□□□□ 0.09
Tram1Q91V04 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tram1Q91V04 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tram1Q91V04 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tram1Q91V04 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Tram1Q91V04 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tram1Q91V04 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tram1Q91V04 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tram1Q91V04 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tram1Q91V04 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Tram1Q91V04 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tram1Q91V04 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tram1Q91V04 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tram1Q91V04 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tram1Q91V04 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tram1Q91V04 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Tram1Q91V04 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tram1Q91V04 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Tram1Q91V04 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tram1Q91V04 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
Tram1Q91V04 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tram1Q91V04 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.6■□□□□ 0.09
Tram1Q91V04 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Tram1Q91V04 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tram1Q91V04 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tram1Q91V04 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tram1Q91V04 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Tram1Q91V04 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tram1Q91V04 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tram1Q91V04 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Tram1Q91V04 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tram1Q91V04 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.59■□□□□ 0.09
Tram1Q91V04 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tram1Q91V04 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tram1Q91V04 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Tram1Q91V04 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tram1Q91V04 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tram1Q91V04 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tram1Q91V04 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tram1Q91V04 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tram1Q91V04 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.59■□□□□ 0.09
Tram1Q91V04 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tram1Q91V04 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tram1Q91V04 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Tram1Q91V04 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tram1Q91V04 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Tram1Q91V04 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tram1Q91V04 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tram1Q91V04 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.59■□□□□ 0.09
Tram1Q91V04 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tram1Q91V04 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tram1Q91V04 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
Tram1Q91V04 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tram1Q91V04 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Tram1Q91V04 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Tram1Q91V04 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tram1Q91V04 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.58■□□□□ 0.09
Tram1Q91V04 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tram1Q91V04 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tram1Q91V04 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Tram1Q91V04 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.58■□□□□ 0.08
Tram1Q91V04 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.58■□□□□ 0.08
Tram1Q91V04 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tram1Q91V04 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tram1Q91V04 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Tram1Q91V04 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Tram1Q91V04 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tram1Q91V04 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tram1Q91V04 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Tram1Q91V04 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.57■□□□□ 0.08
Tram1Q91V04 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tram1Q91V04 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Tram1Q91V04 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tram1Q91V04 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Tram1Q91V04 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tram1Q91V04 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tram1Q91V04 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tram1Q91V04 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tram1Q91V04 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tram1Q91V04 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tram1Q91V04 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tram1Q91V04 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Tram1Q91V04 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Tram1Q91V04 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.57■□□□□ 0.08
Tram1Q91V04 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.57■□□□□ 0.08
Tram1Q91V04 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tram1Q91V04 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tram1Q91V04 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tram1Q91V04 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tram1Q91V04 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tram1Q91V04 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tram1Q91V04 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.56■□□□□ 0.08
Tram1Q91V04 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tram1Q91V04 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Tram1Q91V04 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tram1Q91V04 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tram1Q91V04 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tram1Q91V04 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms