Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.6■□□□□ 0.09
Cspg4Q8VHY0 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.6■□□□□ 0.09
Cspg4Q8VHY0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cspg4Q8VHY0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cspg4Q8VHY0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cspg4Q8VHY0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cspg4Q8VHY0 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.6■□□□□ 0.09
Cspg4Q8VHY0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cspg4Q8VHY0 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.59■□□□□ 0.09
Cspg4Q8VHY0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cspg4Q8VHY0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cspg4Q8VHY0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cspg4Q8VHY0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cspg4Q8VHY0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.59■□□□□ 0.09
Cspg4Q8VHY0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.59■□□□□ 0.09
Cspg4Q8VHY0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cspg4Q8VHY0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cspg4Q8VHY0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cspg4Q8VHY0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.59■□□□□ 0.09
Cspg4Q8VHY0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cspg4Q8VHY0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cspg4Q8VHY0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cspg4Q8VHY0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cspg4Q8VHY0 AW822252-206ENSMUST00000208904 237 ntBASIC15.59■□□□□ 0.09
Cspg4Q8VHY0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.59■□□□□ 0.09
Cspg4Q8VHY0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cspg4Q8VHY0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cspg4Q8VHY0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Cspg4Q8VHY0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cspg4Q8VHY0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cspg4Q8VHY0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.58■□□□□ 0.08
Cspg4Q8VHY0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cspg4Q8VHY0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cspg4Q8VHY0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Cspg4Q8VHY0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cspg4Q8VHY0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cspg4Q8VHY0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cspg4Q8VHY0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cspg4Q8VHY0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cspg4Q8VHY0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cspg4Q8VHY0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cspg4Q8VHY0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.57■□□□□ 0.08
Cspg4Q8VHY0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cspg4Q8VHY0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cspg4Q8VHY0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.57■□□□□ 0.08
Cspg4Q8VHY0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Cspg4Q8VHY0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Cspg4Q8VHY0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.57■□□□□ 0.08
Cspg4Q8VHY0 Gm7063-201ENSMUST00000186840 981 ntBASIC15.57■□□□□ 0.08
Cspg4Q8VHY0 Gm38027-201ENSMUST00000192315 235 ntBASIC15.57■□□□□ 0.08
Cspg4Q8VHY0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.57■□□□□ 0.08
Cspg4Q8VHY0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cspg4Q8VHY0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.57■□□□□ 0.08
Cspg4Q8VHY0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cspg4Q8VHY0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cspg4Q8VHY0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cspg4Q8VHY0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cspg4Q8VHY0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cspg4Q8VHY0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cspg4Q8VHY0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cspg4Q8VHY0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cspg4Q8VHY0 Gm27463-201ENSMUST00000183569 57 ntBASIC15.56■□□□□ 0.08
Cspg4Q8VHY0 Gm38285-201ENSMUST00000192928 922 ntBASIC15.56■□□□□ 0.08
Cspg4Q8VHY0 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.56■□□□□ 0.08
Cspg4Q8VHY0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cspg4Q8VHY0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cspg4Q8VHY0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cspg4Q8VHY0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cspg4Q8VHY0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cspg4Q8VHY0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cspg4Q8VHY0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cspg4Q8VHY0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cspg4Q8VHY0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cspg4Q8VHY0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cspg4Q8VHY0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cspg4Q8VHY0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cspg4Q8VHY0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cspg4Q8VHY0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cspg4Q8VHY0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Cspg4Q8VHY0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cspg4Q8VHY0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.55■□□□□ 0.08
Cspg4Q8VHY0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.55■□□□□ 0.08
Cspg4Q8VHY0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cspg4Q8VHY0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.55■□□□□ 0.08
Cspg4Q8VHY0 Gm5587-201ENSMUST00000206270 674 ntBASIC15.55■□□□□ 0.08
Cspg4Q8VHY0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cspg4Q8VHY0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cspg4Q8VHY0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.55■□□□□ 0.08
Cspg4Q8VHY0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cspg4Q8VHY0 Gm18958-201ENSMUST00000174258 762 ntBASIC15.55■□□□□ 0.08
Cspg4Q8VHY0 Gm22697-201ENSMUST00000175194 63 ntBASIC15.55■□□□□ 0.08
Cspg4Q8VHY0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cspg4Q8VHY0 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cspg4Q8VHY0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cspg4Q8VHY0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cspg4Q8VHY0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cspg4Q8VHY0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cspg4Q8VHY0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cspg4Q8VHY0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cspg4Q8VHY0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms