Protein–RNA interactions for Protein: Q8VEG0

Ccdc71, Coiled-coil domain-containing protein 71, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71Q8VEG0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
Ccdc71Q8VEG0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc71Q8VEG0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc71Q8VEG0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc71Q8VEG0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc71Q8VEG0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ccdc71Q8VEG0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.85■□□□□ 0.61
Ccdc71Q8VEG0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc71Q8VEG0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc71Q8VEG0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ccdc71Q8VEG0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc71Q8VEG0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc71Q8VEG0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc71Q8VEG0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc71Q8VEG0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc71Q8VEG0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc71Q8VEG0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.84■□□□□ 0.61
Ccdc71Q8VEG0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc71Q8VEG0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc71Q8VEG0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc71Q8VEG0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc71Q8VEG0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc71Q8VEG0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc71Q8VEG0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.84■□□□□ 0.61
Ccdc71Q8VEG0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc71Q8VEG0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc71Q8VEG0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc71Q8VEG0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc71Q8VEG0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc71Q8VEG0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc71Q8VEG0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc71Q8VEG0 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.83■□□□□ 0.61
Ccdc71Q8VEG0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc71Q8VEG0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc71Q8VEG0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc71Q8VEG0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc71Q8VEG0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ccdc71Q8VEG0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Ccdc71Q8VEG0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc71Q8VEG0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc71Q8VEG0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc71Q8VEG0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc71Q8VEG0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Ccdc71Q8VEG0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc71Q8VEG0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc71Q8VEG0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc71Q8VEG0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc71Q8VEG0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc71Q8VEG0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc71Q8VEG0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.82■□□□□ 0.6
Ccdc71Q8VEG0 Gm10517-202ENSMUST00000192970 758 ntBASIC18.82■□□□□ 0.6
Ccdc71Q8VEG0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.82■□□□□ 0.6
Ccdc71Q8VEG0 Gm18959-201ENSMUST00000208954 655 ntBASIC18.82■□□□□ 0.6
Ccdc71Q8VEG0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ccdc71Q8VEG0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc71Q8VEG0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc71Q8VEG0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc71Q8VEG0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc71Q8VEG0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc71Q8VEG0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc71Q8VEG0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc71Q8VEG0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc71Q8VEG0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc71Q8VEG0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc71Q8VEG0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.81■□□□□ 0.6
Ccdc71Q8VEG0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc71Q8VEG0 Gm12085-201ENSMUST00000119263 940 ntBASIC18.81■□□□□ 0.6
Ccdc71Q8VEG0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.81■□□□□ 0.6
Ccdc71Q8VEG0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc71Q8VEG0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc71Q8VEG0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.81■□□□□ 0.6
Ccdc71Q8VEG0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc71Q8VEG0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc71Q8VEG0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc71Q8VEG0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ccdc71Q8VEG0 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.81■□□□□ 0.6
Ccdc71Q8VEG0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc71Q8VEG0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.8■□□□□ 0.6
Ccdc71Q8VEG0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.8■□□□□ 0.6
Ccdc71Q8VEG0 Gm27463-201ENSMUST00000183569 57 ntBASIC18.8■□□□□ 0.6
Ccdc71Q8VEG0 Gm21362-201ENSMUST00000194272 928 ntBASIC18.8■□□□□ 0.6
Ccdc71Q8VEG0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc71Q8VEG0 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.8■□□□□ 0.6
Ccdc71Q8VEG0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc71Q8VEG0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc71Q8VEG0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc71Q8VEG0 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.79■□□□□ 0.6
Ccdc71Q8VEG0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc71Q8VEG0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
Ccdc71Q8VEG0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.79■□□□□ 0.6
Ccdc71Q8VEG0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc71Q8VEG0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ccdc71Q8VEG0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc71Q8VEG0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc71Q8VEG0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc71Q8VEG0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc71Q8VEG0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc71Q8VEG0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc71Q8VEG0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc71Q8VEG0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms