Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rprd1aQ8VDS4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rprd1aQ8VDS4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.64■□□□□ 0.57
Rprd1aQ8VDS4 Trmt13-210ENSMUST00000198454 880 ntBASIC18.64■□□□□ 0.57
Rprd1aQ8VDS4 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.64■□□□□ 0.57
Rprd1aQ8VDS4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rprd1aQ8VDS4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rprd1aQ8VDS4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rprd1aQ8VDS4 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.64■□□□□ 0.57
Rprd1aQ8VDS4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rprd1aQ8VDS4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rprd1aQ8VDS4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rprd1aQ8VDS4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rprd1aQ8VDS4 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.64■□□□□ 0.57
Rprd1aQ8VDS4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rprd1aQ8VDS4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rprd1aQ8VDS4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rprd1aQ8VDS4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rprd1aQ8VDS4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rprd1aQ8VDS4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rprd1aQ8VDS4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rprd1aQ8VDS4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rprd1aQ8VDS4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rprd1aQ8VDS4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.63■□□□□ 0.57
Rprd1aQ8VDS4 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.63■□□□□ 0.57
Rprd1aQ8VDS4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rprd1aQ8VDS4 Gm20760-201ENSMUST00000179197 648 ntBASIC18.63■□□□□ 0.57
Rprd1aQ8VDS4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.63■□□□□ 0.57
Rprd1aQ8VDS4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rprd1aQ8VDS4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.63■□□□□ 0.57
Rprd1aQ8VDS4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rprd1aQ8VDS4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.63■□□□□ 0.57
Rprd1aQ8VDS4 Dio3-201ENSMUST00000097228 1449 ntBASIC18.63■□□□□ 0.57
Rprd1aQ8VDS4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rprd1aQ8VDS4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rprd1aQ8VDS4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rprd1aQ8VDS4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rprd1aQ8VDS4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rprd1aQ8VDS4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.62■□□□□ 0.57
Rprd1aQ8VDS4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rprd1aQ8VDS4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Rprd1aQ8VDS4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.62■□□□□ 0.57
Rprd1aQ8VDS4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Rprd1aQ8VDS4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
Rprd1aQ8VDS4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rprd1aQ8VDS4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rprd1aQ8VDS4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rprd1aQ8VDS4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rprd1aQ8VDS4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rprd1aQ8VDS4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rprd1aQ8VDS4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rprd1aQ8VDS4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rprd1aQ8VDS4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
Rprd1aQ8VDS4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rprd1aQ8VDS4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rprd1aQ8VDS4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rprd1aQ8VDS4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rprd1aQ8VDS4 Flg-201ENSMUST00000050758 1488 ntBASIC18.61■□□□□ 0.57
Rprd1aQ8VDS4 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.61■□□□□ 0.57
Rprd1aQ8VDS4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rprd1aQ8VDS4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.61■□□□□ 0.57
Rprd1aQ8VDS4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rprd1aQ8VDS4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rprd1aQ8VDS4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.61■□□□□ 0.57
Rprd1aQ8VDS4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rprd1aQ8VDS4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.61■□□□□ 0.57
Rprd1aQ8VDS4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rprd1aQ8VDS4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rprd1aQ8VDS4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rprd1aQ8VDS4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rprd1aQ8VDS4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rprd1aQ8VDS4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rprd1aQ8VDS4 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.6■□□□□ 0.57
Rprd1aQ8VDS4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rprd1aQ8VDS4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rprd1aQ8VDS4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rprd1aQ8VDS4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rprd1aQ8VDS4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rprd1aQ8VDS4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rprd1aQ8VDS4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rprd1aQ8VDS4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rprd1aQ8VDS4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rprd1aQ8VDS4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rprd1aQ8VDS4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rprd1aQ8VDS4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Rprd1aQ8VDS4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rprd1aQ8VDS4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rprd1aQ8VDS4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rprd1aQ8VDS4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rprd1aQ8VDS4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rprd1aQ8VDS4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.58■□□□□ 0.57
Rprd1aQ8VDS4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rprd1aQ8VDS4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rprd1aQ8VDS4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.58■□□□□ 0.57
Rprd1aQ8VDS4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rprd1aQ8VDS4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Rprd1aQ8VDS4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rprd1aQ8VDS4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rprd1aQ8VDS4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rprd1aQ8VDS4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms