Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap2Q8VC34 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap2Q8VC34 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.9■□□□□ 0.78
Rpap2Q8VC34 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rpap2Q8VC34 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Rpap2Q8VC34 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpap2Q8VC34 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rpap2Q8VC34 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.9■□□□□ 0.78
Rpap2Q8VC34 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpap2Q8VC34 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Rpap2Q8VC34 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpap2Q8VC34 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpap2Q8VC34 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpap2Q8VC34 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpap2Q8VC34 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpap2Q8VC34 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpap2Q8VC34 Fst-202ENSMUST00000223640 2612 ntBASIC19.89■□□□□ 0.78
Rpap2Q8VC34 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rpap2Q8VC34 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rpap2Q8VC34 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Rpap2Q8VC34 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.89■□□□□ 0.77
Rpap2Q8VC34 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rpap2Q8VC34 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rpap2Q8VC34 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rpap2Q8VC34 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpap2Q8VC34 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpap2Q8VC34 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpap2Q8VC34 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpap2Q8VC34 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpap2Q8VC34 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpap2Q8VC34 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpap2Q8VC34 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Rpap2Q8VC34 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpap2Q8VC34 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpap2Q8VC34 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Rpap2Q8VC34 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.88■□□□□ 0.77
Rpap2Q8VC34 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
Rpap2Q8VC34 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpap2Q8VC34 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.88■□□□□ 0.77
Rpap2Q8VC34 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.88■□□□□ 0.77
Rpap2Q8VC34 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rpap2Q8VC34 Gm38285-201ENSMUST00000192928 922 ntBASIC19.88■□□□□ 0.77
Rpap2Q8VC34 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.88■□□□□ 0.77
Rpap2Q8VC34 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpap2Q8VC34 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpap2Q8VC34 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpap2Q8VC34 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpap2Q8VC34 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rpap2Q8VC34 Flg-201ENSMUST00000050758 1488 ntBASIC19.87■□□□□ 0.77
Rpap2Q8VC34 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpap2Q8VC34 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpap2Q8VC34 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.87■□□□□ 0.77
Rpap2Q8VC34 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.87■□□□□ 0.77
Rpap2Q8VC34 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.87■□□□□ 0.77
Rpap2Q8VC34 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpap2Q8VC34 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpap2Q8VC34 Zfp783-201ENSMUST00000095946 670 ntBASIC19.87■□□□□ 0.77
Rpap2Q8VC34 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rpap2Q8VC34 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpap2Q8VC34 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.87■□□□□ 0.77
Rpap2Q8VC34 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpap2Q8VC34 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpap2Q8VC34 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.87■□□□□ 0.77
Rpap2Q8VC34 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpap2Q8VC34 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rpap2Q8VC34 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.87■□□□□ 0.77
Rpap2Q8VC34 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap2Q8VC34 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap2Q8VC34 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap2Q8VC34 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap2Q8VC34 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap2Q8VC34 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Rpap2Q8VC34 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap2Q8VC34 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.86■□□□□ 0.77
Rpap2Q8VC34 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap2Q8VC34 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Rpap2Q8VC34 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.86■□□□□ 0.77
Rpap2Q8VC34 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap2Q8VC34 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Rpap2Q8VC34 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap2Q8VC34 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
Rpap2Q8VC34 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap2Q8VC34 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap2Q8VC34 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpap2Q8VC34 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpap2Q8VC34 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpap2Q8VC34 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rpap2Q8VC34 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpap2Q8VC34 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.85■□□□□ 0.77
Rpap2Q8VC34 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.85■□□□□ 0.77
Rpap2Q8VC34 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpap2Q8VC34 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Rpap2Q8VC34 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Rpap2Q8VC34 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rpap2Q8VC34 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rpap2Q8VC34 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpap2Q8VC34 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpap2Q8VC34 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpap2Q8VC34 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpap2Q8VC34 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms