Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC21.84■■□□□ 1.09
Ccdc9Q8VC31 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc9Q8VC31 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc9Q8VC31 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc9Q8VC31 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc9Q8VC31 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Ccdc9Q8VC31 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc9Q8VC31 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
Ccdc9Q8VC31 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc9Q8VC31 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc9Q8VC31 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc9Q8VC31 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc9Q8VC31 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC21.84■■□□□ 1.09
Ccdc9Q8VC31 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Ccdc9Q8VC31 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc9Q8VC31 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Ccdc9Q8VC31 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc9Q8VC31 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc9Q8VC31 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc9Q8VC31 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc9Q8VC31 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.83■■□□□ 1.09
Ccdc9Q8VC31 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.83■■□□□ 1.09
Ccdc9Q8VC31 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Ccdc9Q8VC31 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Ccdc9Q8VC31 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Ccdc9Q8VC31 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ccdc9Q8VC31 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Ccdc9Q8VC31 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.83■■□□□ 1.08
Ccdc9Q8VC31 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Ccdc9Q8VC31 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ccdc9Q8VC31 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ccdc9Q8VC31 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ccdc9Q8VC31 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ccdc9Q8VC31 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ccdc9Q8VC31 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc9Q8VC31 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc9Q8VC31 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc9Q8VC31 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc9Q8VC31 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Ccdc9Q8VC31 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc9Q8VC31 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc9Q8VC31 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc9Q8VC31 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc9Q8VC31 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc9Q8VC31 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Ccdc9Q8VC31 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc9Q8VC31 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc9Q8VC31 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.81■■□□□ 1.08
Ccdc9Q8VC31 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc9Q8VC31 Gm20628-201ENSMUST00000177363 3215 ntBASIC21.81■■□□□ 1.08
Ccdc9Q8VC31 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.81■■□□□ 1.08
Ccdc9Q8VC31 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc9Q8VC31 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc9Q8VC31 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc9Q8VC31 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc9Q8VC31 Gm43598-201ENSMUST00000202482 2479 ntBASIC21.81■■□□□ 1.08
Ccdc9Q8VC31 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc9Q8VC31 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Ccdc9Q8VC31 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Ccdc9Q8VC31 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC21.8■■□□□ 1.08
Ccdc9Q8VC31 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc9Q8VC31 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc9Q8VC31 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Ccdc9Q8VC31 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.8■■□□□ 1.08
Ccdc9Q8VC31 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.8■■□□□ 1.08
Ccdc9Q8VC31 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Ccdc9Q8VC31 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc9Q8VC31 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc9Q8VC31 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Ccdc9Q8VC31 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc9Q8VC31 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc9Q8VC31 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc9Q8VC31 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc9Q8VC31 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Ccdc9Q8VC31 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc9Q8VC31 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC21.79■■□□□ 1.08
Ccdc9Q8VC31 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc9Q8VC31 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc9Q8VC31 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc9Q8VC31 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc9Q8VC31 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc9Q8VC31 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc9Q8VC31 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc9Q8VC31 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc9Q8VC31 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
Ccdc9Q8VC31 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc9Q8VC31 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc9Q8VC31 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc9Q8VC31 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc9Q8VC31 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc9Q8VC31 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc9Q8VC31 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Ccdc9Q8VC31 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc9Q8VC31 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC21.78■■□□□ 1.08
Ccdc9Q8VC31 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
Ccdc9Q8VC31 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc9Q8VC31 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.78■■□□□ 1.08
Ccdc9Q8VC31 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC21.78■■□□□ 1.08
Ccdc9Q8VC31 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc9Q8VC31 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms