Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup35Q8R4R6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup35Q8R4R6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Nup35Q8R4R6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup35Q8R4R6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup35Q8R4R6 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.81□□□□□ -0.04
Nup35Q8R4R6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup35Q8R4R6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.79□□□□□ -0.04
Nup35Q8R4R6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup35Q8R4R6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup35Q8R4R6 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup35Q8R4R6 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup35Q8R4R6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nup35Q8R4R6 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nup35Q8R4R6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.78□□□□□ -0.04
Nup35Q8R4R6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nup35Q8R4R6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup35Q8R4R6 Gm9847-201ENSMUST00000052528 599 ntBASIC14.78□□□□□ -0.04
Nup35Q8R4R6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nup35Q8R4R6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup35Q8R4R6 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup35Q8R4R6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup35Q8R4R6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup35Q8R4R6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup35Q8R4R6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nup35Q8R4R6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup35Q8R4R6 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup35Q8R4R6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nup35Q8R4R6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nup35Q8R4R6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nup35Q8R4R6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nup35Q8R4R6 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nup35Q8R4R6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nup35Q8R4R6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nup35Q8R4R6 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.77□□□□□ -0.04
Nup35Q8R4R6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nup35Q8R4R6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nup35Q8R4R6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nup35Q8R4R6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.77□□□□□ -0.05
Nup35Q8R4R6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
Nup35Q8R4R6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup35Q8R4R6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nup35Q8R4R6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup35Q8R4R6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup35Q8R4R6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Nup35Q8R4R6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Nup35Q8R4R6 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.77□□□□□ -0.05
Nup35Q8R4R6 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.77□□□□□ -0.05
Nup35Q8R4R6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup35Q8R4R6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup35Q8R4R6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup35Q8R4R6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms