Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC25.84■■□□□ 1.73
Cd109Q8R422 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Cd109Q8R422 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Cd109Q8R422 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC25.84■■□□□ 1.73
Cd109Q8R422 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Cd109Q8R422 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Cd109Q8R422 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Cd109Q8R422 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Cd109Q8R422 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Cd109Q8R422 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Cd109Q8R422 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Cd109Q8R422 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Cd109Q8R422 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC25.83■■□□□ 1.73
Cd109Q8R422 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
Cd109Q8R422 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Cd109Q8R422 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Cd109Q8R422 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Cd109Q8R422 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Cd109Q8R422 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Cd109Q8R422 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Cd109Q8R422 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Cd109Q8R422 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Cd109Q8R422 Gm10517-202ENSMUST00000192970 758 ntBASIC25.82■■□□□ 1.72
Cd109Q8R422 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Cd109Q8R422 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Cd109Q8R422 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Cd109Q8R422 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Cd109Q8R422 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC25.81■■□□□ 1.72
Cd109Q8R422 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Cd109Q8R422 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Cd109Q8R422 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Cd109Q8R422 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Cd109Q8R422 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC25.8■■□□□ 1.72
Cd109Q8R422 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
Cd109Q8R422 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cd109Q8R422 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cd109Q8R422 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Cd109Q8R422 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cd109Q8R422 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cd109Q8R422 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cd109Q8R422 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cd109Q8R422 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
Cd109Q8R422 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cd109Q8R422 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC25.8■■□□□ 1.72
Cd109Q8R422 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
Cd109Q8R422 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cd109Q8R422 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cd109Q8R422 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cd109Q8R422 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
Cd109Q8R422 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Cd109Q8R422 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Cd109Q8R422 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Cd109Q8R422 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
Cd109Q8R422 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Cd109Q8R422 Gm42922-201ENSMUST00000195887 2078 ntBASIC25.79■■□□□ 1.72
Cd109Q8R422 Gm5784-201ENSMUST00000179344 2478 ntBASIC25.79■■□□□ 1.72
Cd109Q8R422 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
Cd109Q8R422 Gm12085-201ENSMUST00000119263 940 ntBASIC25.79■■□□□ 1.72
Cd109Q8R422 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Cd109Q8R422 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC25.79■■□□□ 1.72
Cd109Q8R422 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC25.79■■□□□ 1.72
Cd109Q8R422 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Cd109Q8R422 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Cd109Q8R422 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Cd109Q8R422 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Cd109Q8R422 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Cd109Q8R422 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Cd109Q8R422 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Cd109Q8R422 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
Cd109Q8R422 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC25.78■■□□□ 1.72
Cd109Q8R422 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC25.78■■□□□ 1.72
Cd109Q8R422 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Cd109Q8R422 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
Cd109Q8R422 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Cd109Q8R422 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
Cd109Q8R422 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Cd109Q8R422 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Cd109Q8R422 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
Cd109Q8R422 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Cd109Q8R422 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC25.77■■□□□ 1.72
Cd109Q8R422 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
Cd109Q8R422 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC25.77■■□□□ 1.72
Cd109Q8R422 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC25.77■■□□□ 1.72
Cd109Q8R422 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Cd109Q8R422 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC25.77■■□□□ 1.72
Cd109Q8R422 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Cd109Q8R422 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Cd109Q8R422 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Cd109Q8R422 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Cd109Q8R422 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Cd109Q8R422 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Cd109Q8R422 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Cd109Q8R422 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC25.75■■□□□ 1.71
Cd109Q8R422 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Cd109Q8R422 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Cd109Q8R422 Gm38027-201ENSMUST00000192315 235 ntBASIC25.74■■□□□ 1.71
Cd109Q8R422 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Cd109Q8R422 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
Cd109Q8R422 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Cd109Q8R422 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC25.74■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms