Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Pdlim2Q8R1G6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pdlim2Q8R1G6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pdlim2Q8R1G6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
Pdlim2Q8R1G6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Pdlim2Q8R1G6 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Pdlim2Q8R1G6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pdlim2Q8R1G6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pdlim2Q8R1G6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pdlim2Q8R1G6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pdlim2Q8R1G6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pdlim2Q8R1G6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pdlim2Q8R1G6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pdlim2Q8R1G6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Pdlim2Q8R1G6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pdlim2Q8R1G6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Pdlim2Q8R1G6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pdlim2Q8R1G6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Pdlim2Q8R1G6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pdlim2Q8R1G6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pdlim2Q8R1G6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC20.86■□□□□ 0.93
Pdlim2Q8R1G6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pdlim2Q8R1G6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pdlim2Q8R1G6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pdlim2Q8R1G6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Pdlim2Q8R1G6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pdlim2Q8R1G6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pdlim2Q8R1G6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim2Q8R1G6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim2Q8R1G6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim2Q8R1G6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim2Q8R1G6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim2Q8R1G6 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.84■□□□□ 0.93
Pdlim2Q8R1G6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim2Q8R1G6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim2Q8R1G6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim2Q8R1G6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim2Q8R1G6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim2Q8R1G6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pdlim2Q8R1G6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pdlim2Q8R1G6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pdlim2Q8R1G6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pdlim2Q8R1G6 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Pdlim2Q8R1G6 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pdlim2Q8R1G6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pdlim2Q8R1G6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.83■□□□□ 0.93
Pdlim2Q8R1G6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pdlim2Q8R1G6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pdlim2Q8R1G6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Pdlim2Q8R1G6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pdlim2Q8R1G6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pdlim2Q8R1G6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim2Q8R1G6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim2Q8R1G6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim2Q8R1G6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim2Q8R1G6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim2Q8R1G6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim2Q8R1G6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.82■□□□□ 0.92
Pdlim2Q8R1G6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.82■□□□□ 0.92
Pdlim2Q8R1G6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
Pdlim2Q8R1G6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim2Q8R1G6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pdlim2Q8R1G6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Pdlim2Q8R1G6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim2Q8R1G6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pdlim2Q8R1G6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim2Q8R1G6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim2Q8R1G6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.81■□□□□ 0.92
Pdlim2Q8R1G6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim2Q8R1G6 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.81■□□□□ 0.92
Pdlim2Q8R1G6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim2Q8R1G6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
Pdlim2Q8R1G6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.81■□□□□ 0.92
Pdlim2Q8R1G6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim2Q8R1G6 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC20.81■□□□□ 0.92
Pdlim2Q8R1G6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim2Q8R1G6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Pdlim2Q8R1G6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim2Q8R1G6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim2Q8R1G6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim2Q8R1G6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim2Q8R1G6 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.8■□□□□ 0.92
Pdlim2Q8R1G6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.8■□□□□ 0.92
Pdlim2Q8R1G6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
Pdlim2Q8R1G6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim2Q8R1G6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim2Q8R1G6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Pdlim2Q8R1G6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim2Q8R1G6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim2Q8R1G6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim2Q8R1G6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pdlim2Q8R1G6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.79■□□□□ 0.92
Pdlim2Q8R1G6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pdlim2Q8R1G6 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Pdlim2Q8R1G6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pdlim2Q8R1G6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Pdlim2Q8R1G6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.79■□□□□ 0.92
Pdlim2Q8R1G6 Gm5921-201ENSMUST00000075898 882 ntBASIC20.79■□□□□ 0.92
Pdlim2Q8R1G6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pdlim2Q8R1G6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms