Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Prpf39Q8K2Z2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf39Q8K2Z2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf39Q8K2Z2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf39Q8K2Z2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf39Q8K2Z2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf39Q8K2Z2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf39Q8K2Z2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Prpf39Q8K2Z2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf39Q8K2Z2 Gm2399-201ENSMUST00000104944 225 ntBASIC18.81■□□□□ 0.6
Prpf39Q8K2Z2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Prpf39Q8K2Z2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Prpf39Q8K2Z2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf39Q8K2Z2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf39Q8K2Z2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
Prpf39Q8K2Z2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.8■□□□□ 0.6
Prpf39Q8K2Z2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Prpf39Q8K2Z2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf39Q8K2Z2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf39Q8K2Z2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf39Q8K2Z2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf39Q8K2Z2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf39Q8K2Z2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf39Q8K2Z2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf39Q8K2Z2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf39Q8K2Z2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf39Q8K2Z2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf39Q8K2Z2 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.79■□□□□ 0.6
Prpf39Q8K2Z2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Prpf39Q8K2Z2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf39Q8K2Z2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Prpf39Q8K2Z2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Prpf39Q8K2Z2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf39Q8K2Z2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf39Q8K2Z2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Prpf39Q8K2Z2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf39Q8K2Z2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf39Q8K2Z2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf39Q8K2Z2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Prpf39Q8K2Z2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf39Q8K2Z2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf39Q8K2Z2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Prpf39Q8K2Z2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf39Q8K2Z2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf39Q8K2Z2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf39Q8K2Z2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Prpf39Q8K2Z2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.78■□□□□ 0.6
Prpf39Q8K2Z2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf39Q8K2Z2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.78■□□□□ 0.6
Prpf39Q8K2Z2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf39Q8K2Z2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf39Q8K2Z2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Prpf39Q8K2Z2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.78■□□□□ 0.6
Prpf39Q8K2Z2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf39Q8K2Z2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf39Q8K2Z2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf39Q8K2Z2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Prpf39Q8K2Z2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Prpf39Q8K2Z2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.77■□□□□ 0.6
Prpf39Q8K2Z2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Prpf39Q8K2Z2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.77■□□□□ 0.6
Prpf39Q8K2Z2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.77■□□□□ 0.6
Prpf39Q8K2Z2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Prpf39Q8K2Z2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf39Q8K2Z2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Prpf39Q8K2Z2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Prpf39Q8K2Z2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.77■□□□□ 0.59
Prpf39Q8K2Z2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf39Q8K2Z2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf39Q8K2Z2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf39Q8K2Z2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.76■□□□□ 0.59
Prpf39Q8K2Z2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf39Q8K2Z2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.76■□□□□ 0.59
Prpf39Q8K2Z2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf39Q8K2Z2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Prpf39Q8K2Z2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf39Q8K2Z2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf39Q8K2Z2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf39Q8K2Z2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf39Q8K2Z2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Prpf39Q8K2Z2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.75■□□□□ 0.59
Prpf39Q8K2Z2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf39Q8K2Z2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Prpf39Q8K2Z2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Prpf39Q8K2Z2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf39Q8K2Z2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.75■□□□□ 0.59
Prpf39Q8K2Z2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf39Q8K2Z2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.75■□□□□ 0.59
Prpf39Q8K2Z2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf39Q8K2Z2 Gm4968-201ENSMUST00000071458 858 ntBASIC18.75■□□□□ 0.59
Prpf39Q8K2Z2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf39Q8K2Z2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf39Q8K2Z2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.75■□□□□ 0.59
Prpf39Q8K2Z2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf39Q8K2Z2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf39Q8K2Z2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf39Q8K2Z2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Prpf39Q8K2Z2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.74■□□□□ 0.59
Prpf39Q8K2Z2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Prpf39Q8K2Z2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms