Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cnot3Q8K0V4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cnot3Q8K0V4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cnot3Q8K0V4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cnot3Q8K0V4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cnot3Q8K0V4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cnot3Q8K0V4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cnot3Q8K0V4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cnot3Q8K0V4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cnot3Q8K0V4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cnot3Q8K0V4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cnot3Q8K0V4 Gm43137-201ENSMUST00000198052 594 ntBASIC17.05■□□□□ 0.32
Cnot3Q8K0V4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.05■□□□□ 0.32
Cnot3Q8K0V4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cnot3Q8K0V4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cnot3Q8K0V4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cnot3Q8K0V4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cnot3Q8K0V4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cnot3Q8K0V4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Cnot3Q8K0V4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cnot3Q8K0V4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cnot3Q8K0V4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cnot3Q8K0V4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cnot3Q8K0V4 Fst-202ENSMUST00000223640 2612 ntBASIC17.04■□□□□ 0.32
Cnot3Q8K0V4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cnot3Q8K0V4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cnot3Q8K0V4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cnot3Q8K0V4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cnot3Q8K0V4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cnot3Q8K0V4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.04■□□□□ 0.32
Cnot3Q8K0V4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cnot3Q8K0V4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cnot3Q8K0V4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cnot3Q8K0V4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cnot3Q8K0V4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cnot3Q8K0V4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cnot3Q8K0V4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cnot3Q8K0V4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cnot3Q8K0V4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cnot3Q8K0V4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cnot3Q8K0V4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cnot3Q8K0V4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cnot3Q8K0V4 Gm27801-201ENSMUST00000184174 223 ntBASIC17.03■□□□□ 0.32
Cnot3Q8K0V4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.03■□□□□ 0.32
Cnot3Q8K0V4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cnot3Q8K0V4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cnot3Q8K0V4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cnot3Q8K0V4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cnot3Q8K0V4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cnot3Q8K0V4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.03■□□□□ 0.32
Cnot3Q8K0V4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cnot3Q8K0V4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cnot3Q8K0V4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cnot3Q8K0V4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cnot3Q8K0V4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Cnot3Q8K0V4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cnot3Q8K0V4 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.02■□□□□ 0.32
Cnot3Q8K0V4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cnot3Q8K0V4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Cnot3Q8K0V4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Cnot3Q8K0V4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cnot3Q8K0V4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cnot3Q8K0V4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cnot3Q8K0V4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cnot3Q8K0V4 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.02■□□□□ 0.32
Cnot3Q8K0V4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Cnot3Q8K0V4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cnot3Q8K0V4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cnot3Q8K0V4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cnot3Q8K0V4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cnot3Q8K0V4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cnot3Q8K0V4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Cnot3Q8K0V4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cnot3Q8K0V4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cnot3Q8K0V4 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cnot3Q8K0V4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cnot3Q8K0V4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cnot3Q8K0V4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cnot3Q8K0V4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cnot3Q8K0V4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cnot3Q8K0V4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cnot3Q8K0V4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.01■□□□□ 0.31
Cnot3Q8K0V4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cnot3Q8K0V4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cnot3Q8K0V4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cnot3Q8K0V4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cnot3Q8K0V4 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.01■□□□□ 0.31
Cnot3Q8K0V4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cnot3Q8K0V4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cnot3Q8K0V4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cnot3Q8K0V4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cnot3Q8K0V4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cnot3Q8K0V4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.01■□□□□ 0.31
Cnot3Q8K0V4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cnot3Q8K0V4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cnot3Q8K0V4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cnot3Q8K0V4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cnot3Q8K0V4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cnot3Q8K0V4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17■□□□□ 0.31
Cnot3Q8K0V4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms