Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Depdc1aQ8CIG0 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.49■□□□□ 0.87
Depdc1aQ8CIG0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Depdc1aQ8CIG0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Depdc1aQ8CIG0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Depdc1aQ8CIG0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.48■□□□□ 0.87
Depdc1aQ8CIG0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Depdc1aQ8CIG0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Depdc1aQ8CIG0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Depdc1aQ8CIG0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Depdc1aQ8CIG0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.48■□□□□ 0.87
Depdc1aQ8CIG0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Depdc1aQ8CIG0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.48■□□□□ 0.87
Depdc1aQ8CIG0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Depdc1aQ8CIG0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Depdc1aQ8CIG0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Depdc1aQ8CIG0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Depdc1aQ8CIG0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Depdc1aQ8CIG0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Depdc1aQ8CIG0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.47■□□□□ 0.87
Depdc1aQ8CIG0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Depdc1aQ8CIG0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.47■□□□□ 0.87
Depdc1aQ8CIG0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.47■□□□□ 0.87
Depdc1aQ8CIG0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Depdc1aQ8CIG0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Depdc1aQ8CIG0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Depdc1aQ8CIG0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Depdc1aQ8CIG0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.47■□□□□ 0.87
Depdc1aQ8CIG0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Depdc1aQ8CIG0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Depdc1aQ8CIG0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Depdc1aQ8CIG0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Depdc1aQ8CIG0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Depdc1aQ8CIG0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Depdc1aQ8CIG0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.46■□□□□ 0.87
Depdc1aQ8CIG0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.46■□□□□ 0.87
Depdc1aQ8CIG0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Depdc1aQ8CIG0 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.46■□□□□ 0.87
Depdc1aQ8CIG0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Depdc1aQ8CIG0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Depdc1aQ8CIG0 Tgds-204ENSMUST00000228543 1594 ntBASIC20.46■□□□□ 0.87
Depdc1aQ8CIG0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Depdc1aQ8CIG0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Depdc1aQ8CIG0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Depdc1aQ8CIG0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.87
Depdc1aQ8CIG0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Depdc1aQ8CIG0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Depdc1aQ8CIG0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Depdc1aQ8CIG0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Depdc1aQ8CIG0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Depdc1aQ8CIG0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Depdc1aQ8CIG0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Depdc1aQ8CIG0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Depdc1aQ8CIG0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.45■□□□□ 0.86
Depdc1aQ8CIG0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Depdc1aQ8CIG0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Depdc1aQ8CIG0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Depdc1aQ8CIG0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Depdc1aQ8CIG0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Depdc1aQ8CIG0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Depdc1aQ8CIG0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Depdc1aQ8CIG0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Depdc1aQ8CIG0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.45■□□□□ 0.86
Depdc1aQ8CIG0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Depdc1aQ8CIG0 Iqck-206ENSMUST00000208658 2891 ntBASIC20.44■□□□□ 0.86
Depdc1aQ8CIG0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Depdc1aQ8CIG0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Depdc1aQ8CIG0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Depdc1aQ8CIG0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Depdc1aQ8CIG0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Depdc1aQ8CIG0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Depdc1aQ8CIG0 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.44■□□□□ 0.86
Depdc1aQ8CIG0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Depdc1aQ8CIG0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Depdc1aQ8CIG0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.44■□□□□ 0.86
Depdc1aQ8CIG0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Depdc1aQ8CIG0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.43■□□□□ 0.86
Depdc1aQ8CIG0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Depdc1aQ8CIG0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Depdc1aQ8CIG0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Depdc1aQ8CIG0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Depdc1aQ8CIG0 Mir5122-201ENSMUST00000175004 89 ntBASIC20.43■□□□□ 0.86
Depdc1aQ8CIG0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Depdc1aQ8CIG0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Depdc1aQ8CIG0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Depdc1aQ8CIG0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Depdc1aQ8CIG0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Depdc1aQ8CIG0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Depdc1aQ8CIG0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Depdc1aQ8CIG0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Depdc1aQ8CIG0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.42■□□□□ 0.86
Depdc1aQ8CIG0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.42■□□□□ 0.86
Depdc1aQ8CIG0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Depdc1aQ8CIG0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Depdc1aQ8CIG0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Depdc1aQ8CIG0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.42■□□□□ 0.86
Depdc1aQ8CIG0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Depdc1aQ8CIG0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Depdc1aQ8CIG0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Depdc1aQ8CIG0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms