Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clip4Q8CI96 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.21■□□□□ 0.51
Clip4Q8CI96 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clip4Q8CI96 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.21■□□□□ 0.51
Clip4Q8CI96 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.21■□□□□ 0.51
Clip4Q8CI96 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Clip4Q8CI96 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clip4Q8CI96 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clip4Q8CI96 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clip4Q8CI96 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clip4Q8CI96 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clip4Q8CI96 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clip4Q8CI96 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.21■□□□□ 0.51
Clip4Q8CI96 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clip4Q8CI96 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clip4Q8CI96 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Clip4Q8CI96 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clip4Q8CI96 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clip4Q8CI96 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clip4Q8CI96 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clip4Q8CI96 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clip4Q8CI96 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Clip4Q8CI96 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clip4Q8CI96 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.2■□□□□ 0.5
Clip4Q8CI96 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clip4Q8CI96 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clip4Q8CI96 Gm7290-201ENSMUST00000104990 617 ntBASIC18.2■□□□□ 0.5
Clip4Q8CI96 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.2■□□□□ 0.5
Clip4Q8CI96 Gm12918-201ENSMUST00000120234 636 ntBASIC18.2■□□□□ 0.5
Clip4Q8CI96 Gm15710-201ENSMUST00000121821 636 ntBASIC18.2■□□□□ 0.5
Clip4Q8CI96 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.2■□□□□ 0.5
Clip4Q8CI96 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clip4Q8CI96 Gm5075-201ENSMUST00000196916 622 ntBASIC18.2■□□□□ 0.5
Clip4Q8CI96 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clip4Q8CI96 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.2■□□□□ 0.5
Clip4Q8CI96 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.2■□□□□ 0.5
Clip4Q8CI96 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clip4Q8CI96 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clip4Q8CI96 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clip4Q8CI96 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clip4Q8CI96 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clip4Q8CI96 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clip4Q8CI96 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clip4Q8CI96 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clip4Q8CI96 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clip4Q8CI96 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clip4Q8CI96 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clip4Q8CI96 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clip4Q8CI96 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clip4Q8CI96 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clip4Q8CI96 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clip4Q8CI96 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clip4Q8CI96 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clip4Q8CI96 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
Clip4Q8CI96 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clip4Q8CI96 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clip4Q8CI96 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.19■□□□□ 0.5
Clip4Q8CI96 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clip4Q8CI96 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clip4Q8CI96 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clip4Q8CI96 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Clip4Q8CI96 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clip4Q8CI96 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clip4Q8CI96 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clip4Q8CI96 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clip4Q8CI96 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clip4Q8CI96 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.18■□□□□ 0.5
Clip4Q8CI96 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Clip4Q8CI96 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
Clip4Q8CI96 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clip4Q8CI96 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clip4Q8CI96 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clip4Q8CI96 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.18■□□□□ 0.5
Clip4Q8CI96 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clip4Q8CI96 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clip4Q8CI96 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clip4Q8CI96 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Clip4Q8CI96 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clip4Q8CI96 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Clip4Q8CI96 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clip4Q8CI96 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Clip4Q8CI96 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clip4Q8CI96 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.17■□□□□ 0.5
Clip4Q8CI96 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.17■□□□□ 0.5
Clip4Q8CI96 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.17■□□□□ 0.5
Clip4Q8CI96 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clip4Q8CI96 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clip4Q8CI96 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clip4Q8CI96 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clip4Q8CI96 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clip4Q8CI96 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clip4Q8CI96 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Clip4Q8CI96 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clip4Q8CI96 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Clip4Q8CI96 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clip4Q8CI96 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clip4Q8CI96 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clip4Q8CI96 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clip4Q8CI96 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clip4Q8CI96 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms