Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Rsph6aQ8CDR2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Rsph6aQ8CDR2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Rsph6aQ8CDR2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rsph6aQ8CDR2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rsph6aQ8CDR2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rsph6aQ8CDR2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rsph6aQ8CDR2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Rsph6aQ8CDR2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC23.7■■□□□ 1.39
Rsph6aQ8CDR2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rsph6aQ8CDR2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rsph6aQ8CDR2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Rsph6aQ8CDR2 Gm16042-201ENSMUST00000204813 1247 ntBASIC23.7■■□□□ 1.38
Rsph6aQ8CDR2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rsph6aQ8CDR2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rsph6aQ8CDR2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rsph6aQ8CDR2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Rsph6aQ8CDR2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rsph6aQ8CDR2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rsph6aQ8CDR2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rsph6aQ8CDR2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rsph6aQ8CDR2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rsph6aQ8CDR2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rsph6aQ8CDR2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Rsph6aQ8CDR2 Gm21814-202ENSMUST00000203277 873 ntBASIC23.69■■□□□ 1.38
Rsph6aQ8CDR2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Rsph6aQ8CDR2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rsph6aQ8CDR2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rsph6aQ8CDR2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rsph6aQ8CDR2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rsph6aQ8CDR2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rsph6aQ8CDR2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC23.68■■□□□ 1.38
Rsph6aQ8CDR2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rsph6aQ8CDR2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rsph6aQ8CDR2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rsph6aQ8CDR2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC23.68■■□□□ 1.38
Rsph6aQ8CDR2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rsph6aQ8CDR2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rsph6aQ8CDR2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Rsph6aQ8CDR2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rsph6aQ8CDR2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rsph6aQ8CDR2 Gm12382-201ENSMUST00000122005 922 ntBASIC23.67■■□□□ 1.38
Rsph6aQ8CDR2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC23.67■■□□□ 1.38
Rsph6aQ8CDR2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rsph6aQ8CDR2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Rsph6aQ8CDR2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Rsph6aQ8CDR2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rsph6aQ8CDR2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rsph6aQ8CDR2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC23.66■■□□□ 1.38
Rsph6aQ8CDR2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Rsph6aQ8CDR2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
Rsph6aQ8CDR2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
Rsph6aQ8CDR2 Gm43231-201ENSMUST00000202960 2258 ntBASIC23.66■■□□□ 1.38
Rsph6aQ8CDR2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rsph6aQ8CDR2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Rsph6aQ8CDR2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rsph6aQ8CDR2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rsph6aQ8CDR2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rsph6aQ8CDR2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rsph6aQ8CDR2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC23.65■■□□□ 1.38
Rsph6aQ8CDR2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC23.65■■□□□ 1.38
Rsph6aQ8CDR2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rsph6aQ8CDR2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC23.65■■□□□ 1.38
Rsph6aQ8CDR2 Gm5417-201ENSMUST00000079706 384 ntBASIC23.65■■□□□ 1.38
Rsph6aQ8CDR2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rsph6aQ8CDR2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rsph6aQ8CDR2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Rsph6aQ8CDR2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rsph6aQ8CDR2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC23.64■■□□□ 1.38
Rsph6aQ8CDR2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rsph6aQ8CDR2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rsph6aQ8CDR2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
Rsph6aQ8CDR2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Rsph6aQ8CDR2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
Rsph6aQ8CDR2 Gm29994-201ENSMUST00000195495 1193 ntBASIC23.64■■□□□ 1.37
Rsph6aQ8CDR2 AC135963.1-201ENSMUST00000211640 717 ntBASIC23.64■■□□□ 1.37
Rsph6aQ8CDR2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rsph6aQ8CDR2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rsph6aQ8CDR2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rsph6aQ8CDR2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rsph6aQ8CDR2 Gm7712-202ENSMUST00000222331 1510 ntBASIC23.64■■□□□ 1.37
Rsph6aQ8CDR2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Rsph6aQ8CDR2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Rsph6aQ8CDR2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rsph6aQ8CDR2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rsph6aQ8CDR2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC23.63■■□□□ 1.37
Rsph6aQ8CDR2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Rsph6aQ8CDR2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Rsph6aQ8CDR2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rsph6aQ8CDR2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rsph6aQ8CDR2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rsph6aQ8CDR2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rsph6aQ8CDR2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rsph6aQ8CDR2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rsph6aQ8CDR2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rsph6aQ8CDR2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rsph6aQ8CDR2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rsph6aQ8CDR2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Rsph6aQ8CDR2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Rsph6aQ8CDR2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms