Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc87Q8CDL9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc87Q8CDL9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.23■□□□□ 0.67
Ccdc87Q8CDL9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc87Q8CDL9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc87Q8CDL9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.23■□□□□ 0.67
Ccdc87Q8CDL9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc87Q8CDL9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc87Q8CDL9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc87Q8CDL9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc87Q8CDL9 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.22■□□□□ 0.67
Ccdc87Q8CDL9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc87Q8CDL9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc87Q8CDL9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Ccdc87Q8CDL9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc87Q8CDL9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc87Q8CDL9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc87Q8CDL9 Gm26571-201ENSMUST00000181399 666 ntBASIC19.22■□□□□ 0.67
Ccdc87Q8CDL9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc87Q8CDL9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc87Q8CDL9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc87Q8CDL9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc87Q8CDL9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc87Q8CDL9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc87Q8CDL9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc87Q8CDL9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc87Q8CDL9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc87Q8CDL9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc87Q8CDL9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc87Q8CDL9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc87Q8CDL9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.21■□□□□ 0.67
Ccdc87Q8CDL9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc87Q8CDL9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc87Q8CDL9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc87Q8CDL9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.21■□□□□ 0.67
Ccdc87Q8CDL9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc87Q8CDL9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc87Q8CDL9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Ccdc87Q8CDL9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc87Q8CDL9 Reep4-203ENSMUST00000226563 1444 ntBASIC19.2■□□□□ 0.66
Ccdc87Q8CDL9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc87Q8CDL9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc87Q8CDL9 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.2■□□□□ 0.66
Ccdc87Q8CDL9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.2■□□□□ 0.66
Ccdc87Q8CDL9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.2■□□□□ 0.66
Ccdc87Q8CDL9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc87Q8CDL9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc87Q8CDL9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc87Q8CDL9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc87Q8CDL9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc87Q8CDL9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc87Q8CDL9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
Ccdc87Q8CDL9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc87Q8CDL9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc87Q8CDL9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc87Q8CDL9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc87Q8CDL9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc87Q8CDL9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc87Q8CDL9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc87Q8CDL9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc87Q8CDL9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc87Q8CDL9 Gm10033-202ENSMUST00000211874 928 ntBASIC19.19■□□□□ 0.66
Ccdc87Q8CDL9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc87Q8CDL9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc87Q8CDL9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc87Q8CDL9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ccdc87Q8CDL9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc87Q8CDL9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc87Q8CDL9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc87Q8CDL9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.18■□□□□ 0.66
Ccdc87Q8CDL9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Ccdc87Q8CDL9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.18■□□□□ 0.66
Ccdc87Q8CDL9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc87Q8CDL9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ccdc87Q8CDL9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ccdc87Q8CDL9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc87Q8CDL9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.18■□□□□ 0.66
Ccdc87Q8CDL9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.18■□□□□ 0.66
Ccdc87Q8CDL9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.18■□□□□ 0.66
Ccdc87Q8CDL9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.18■□□□□ 0.66
Ccdc87Q8CDL9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc87Q8CDL9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc87Q8CDL9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc87Q8CDL9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc87Q8CDL9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc87Q8CDL9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc87Q8CDL9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc87Q8CDL9 Gm13234-201ENSMUST00000120010 747 ntBASIC19.17■□□□□ 0.66
Ccdc87Q8CDL9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.17■□□□□ 0.66
Ccdc87Q8CDL9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc87Q8CDL9 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.17■□□□□ 0.66
Ccdc87Q8CDL9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc87Q8CDL9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc87Q8CDL9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc87Q8CDL9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc87Q8CDL9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.17■□□□□ 0.66
Ccdc87Q8CDL9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc87Q8CDL9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc87Q8CDL9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc87Q8CDL9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms